| Protein: | SPCC320.05 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 667 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC320.05.
| Description | E-value | Query Range |
Subject Range |
|
|
387.0 | [0..29] | [659..48] |
|
|
387.0 | [0..5] | [665..63] |
|
|
378.0 | [0..2] | [665..26] |
|
|
376.0 | [0..28] | [659..51] |
|
|
376.0 | [0..28] | [659..51] |
|
|
375.0 | [0..28] | [659..51] |
|
|
375.0 | [0..28] | [659..51] |
|
|
374.0 | [0..28] | [659..51] |
|
Region A: Residues: [1-239] |
1 11 21 31 41 51
| | | | | |
1 MSSPSENHLL GPKTSFIDNR TSTSRPLHEI PSYQSLARRS STWKRANIPQ QKPSLVRRIN 60
61 YYIPVLHWLP NYSLRNIIWD VLAGCSTACL SVPIALSFAQ TFLGVPPIYI LTGTAIGPIL 120
121 YCLFTACPLI SIGPEAGMCL LIAENIHQRV LSKADVPQET AILVTGLIAF IAGIINLAAG 180
181 LFRLGFLDAL VSPVLLRGCI LSISMIIMIN QGSVFFGFSG VKYKGSDFPI DKLMFLIRN
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [240-384] |
1 11 21 31 41 51
| | | | | |
1 MSKANIYTTI LSCITISLLI GCRNLKSKLS AKYPRIVSIP DAVIILLLGS FLSKKFDWHS 60
61 NYGIAILGEI KTTILLPKLP LPEKNKLHFI TQSLQTGVMC SFLAFIDTVI AVKAISLQTN 120
121 NLIRSNRELI SLGAANIGSS LFCGL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [385-518] |
1 11 21 31 41 51
| | | | | |
1 PICGGYLRTK CNIMSGARTQ VATIACSVLI LLATFFIMPV FSTVPTCMLA SMVVSLGVSL 60
61 FADAAVEIFK LARIRVWWEL GIIFSIATCT MMFGLETGII FGLSITVMQI IRHSTRSRIM 120
121 FRSPTSNGTA EFIL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [519-667] |
1 11 21 31 41 51
| | | | | |
1 EDAASTLSHR TNPSSTAVES APRILVVRIP EPLFFANVSQ LEDRLNRLEK YGHPRMHPGE 60
61 TPYRRIEDIE VVVFDMVGVS SIDSSALFAF QRILKEYVEH QVEVHLVSLD PQVLHIFEKH 120
121 GLLDLIGGYD HVQDSIKKVD ALCDIELGV
|
| Detection Method: | |
| Confidence: | 9.69897 |
| Match: | 1th8B |
| Description: | Crystal Structures of the ADP and ATP bound forms of the Bacillus Anti-sigma factor SpoIIAB in complex with the Anti-anti-sigma SpoIIAA: inhibitory complex with ADP, crystal form II |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 2.23164933258149 | bayes_pls_golite062009 |
| protein binding | 1.6097880273634 | bayes_pls_golite062009 |
