| Protein: | ams1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1077 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ams1.
| Description | E-value | Query Range |
Subject Range |
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1113.0 | [0..1] | [1077..12] |
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1096.0 | [0..2] | [1077..68] |
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1096.0 | [0..1] | [1077..12] |
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1063.0 | [0..2] | [1077..11] |
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1060.0 | [0..2] | [1077..11] |
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1060.0 | [0..2] | [1077..11] |
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1052.0 | [0..2] | [1077..11] |
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1047.0 | [0..2] | [1077..13] |
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1045.0 | [0..2] | [1032..11] |
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Region A: Residues: [1-99] |
1 11 21 31 41 51
| | | | | |
1 MTLFPVLNNT PVGKQVDSIY ESRLDQFLSE GQYRDFNLPS VYDHARIDNP SGDVNNDLSK 60
61 GFVDLKVYRV PDLSRPSFNE VVGHKKFDET ASKGDTFGP
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.711 | N/A | N/A | d.8.1 | Urease, gamma-subunit |
| View | Download | 0.593 | N/A | N/A | a.7.14 | Description not found. |
| View | Download | 0.590 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.586 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.528 | N/A | N/A | a.5.4 | Elongation factor TFIIS domain 2 |
| View | Download | 0.526 | N/A | N/A | a.5.4 | Elongation factor TFIIS domain 2 |
| View | Download | 0.487 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.470 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.372 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.348 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.292 | N/A | N/A | a.74.1 | Cyclin-like |
| View | Download | 0.246 | N/A | N/A | a.74.1 | Cyclin-like |
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Region A: Residues: [100-249] |
1 11 21 31 41 51
| | | | | |
1 SWATFWFEVH IRLPKSWAKY EQVIFQWNCD NEGLVYSQDG VPLQAFSGSE RTDFILPDSW 60
61 KTTEDTFYIE MACNGMFGTG AGSQIAPPDP NRYFTLTKAD LVAPNLPAMA LAYDFLLMQQ 120
121 CVKQLPSNCW QKYKARQICN DIMNTFHPND
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| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.748 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.743 | N/A | N/A | a.118.9 | ENTH/VHS domain |
| View | Download | 0.590 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.589 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.587 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.545 | N/A | N/A | a.118.1 | ARM repeat |
| View | Download | 0.525 | N/A | N/A | a.192.1 | Description not found. |
| View | Download | 0.508 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.376 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.278 | N/A | N/A | a.1.1 | Globin-like |
| View | Download | 0.264 | N/A | N/A | b.66.1 | Hemopexin-like domain |
| View | Download | 0.245 | N/A | N/A | d.110.4 | SNARE-like |
| View | Download | 0.238 | N/A | N/A | d.198.1 | Type III secretory system chaperone |
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Region A: Residues: [250-986] |
1 11 21 31 41 51
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1 LSTINECRNL AKAFLGNDID SEAVFEKNND KANVFAIGHC HIDTAWLWPF AETRRKIVRS 60
61 WATQMNIMDR YPEYQFVCSQ ALQYLWLKED HPDVFEKLKE YVNQNKFIPI GGSWVEHDTN 120
121 IPNGESLIRQ FLLGQHFFEK EFGVRCRTFW LPDTFGYSSQ IPQICRLCGM DRFLTQKLSW 180
181 NNINSFPTST FNWVALDGSQ VICHMPPANT YTADTNVNDV LHSIDQHKNL VNDQAGLLVF 240
241 GIGDGGGGPT PEMLEKLRRC KGIANTVGYL PNVKLGNTVD EFFDGILKRT NAGQTLPSWN 300
301 GELYFEFHRG TYTTQAELKK LMRKVEIALH DAEYVSTLAS IFSKDYSYPK ESLQDLWRDT 360
361 LLCQFHDVLP GSCIEMVYKD AIPIMSKVLK NTEALLWQAI EQLGFKKASS SDNKEQLCLL 420
421 NTLPWNVRGV ITETEENKLV YFESCDGKGI LTAAHTSLKH PAAAYQKDDN FILVNDHLRV 480
481 TIAPNGLILS LFDLHKEREI LDLKSGKNHA GANQYVLFED TPLSWQAWDT EVFSLEKYEV 540
541 LDKGKVSIKE SGPLRASVVV DIPISELSHM KATISLEGYN DCSEFTGVNF TCEVDWHESC 600
601 KFLKVEFPVD IHSEFASYET QFGITKRPTH YNTSWDVAKF EVCHQKFADY SDFTYGVSVL 660
661 NDCKYGFSTH GNLMRLSLLR SPKQPDAHAD MGKHTIRYAV YPHSKPLDSS TVRAAHKFNS 720
721 NFRLLTRASD TANLDIF
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| Detection Method: | |
| Confidence: | 156.0 |
| Match: | 1ps3A |
| Description: | Golgi alpha-mannosidase II in complex with kifunensine |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [987-1077] |
1 11 21 31 41 51
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1 DAFQLVGEPN VILSHIKMAE KGKSIILRVY ESLGGKSRAR LVIKSLTVAS VTKCNGLEED 60
61 LEELCTLKSN DYYEVPIELR AFEIATFKVN L
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| Detection Method: | |
| Confidence: | 8.09691 |
| Match: | 1o7dE |
| Description: | The structure of the bovine lysosomal a-mannosidase suggests a novel mechanism for low pH activation |
Matching Structure (courtesy of the PDB): |
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