| Protein: | SPBC1683.05 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 559 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC1683.05.
| Description | E-value | Query Range |
Subject Range |
|
|
346.0 | [0..35] | [528..5] |
|
|
344.0 | [0..7] | [526..35] |
|
|
339.0 | [0..7] | [526..35] |
|
|
331.0 | [0..36] | [528..7] |
|
|
330.0 | [0..49] | [526..120] |
|
Region A: Residues: [1-482] |
1 11 21 31 41 51
| | | | | |
1 MEDPKSDEKF DIGISEKNLD VGFGESSSVD VPVKGRFASF LKKLELSSGP EKENIDLRPT 60
61 PPDRRHYSAL DIIYLWSCNG ISASAFRTGT SYMEMGLSPK QALAALIAGN VFIAMPMTLN 120
121 GLFGSHYHIP FAVQSRASFG YYFNTLIILL RFIAGLFYYG TNVYTGAECV QTILYAIFKS 180
181 FRSYKNRLPA DAGITSDFLI SYFVYWVISF PFHLIRPEYL QRFFLIKSIS TYIACFAMLI 240
241 FLLCNVGSHV VWDQPATVSG RSWSWVFMCA LNSSVAGFST LAVNVNDFTR YVKHPKTPYV 300
301 QMLILPLVAA VSAPIGIVSG VASKIMYGTA MWDPLQIANN WTSRGGRAAA FFMGLTYLVS 360
361 MIAQNISDNT VAAANDLLYF FPRYLDIRRA QVIVIIIGAW AIVPWKILQN GTAFLAFLGS 420
421 LSIFLGPAAG IFVADKFKNH HKYDIDEFYN PSGIYRYNKL GLNWRALIAF LCACVPLIPG 480
481 MA
|
| Detection Method: |  |
| Confidence: | 6.69897 |
| Match: | 2a65A |
| Description: | Crystal structure of LEUTAA, a bacterial homolog of Na+/Cl--dependent neurotransmitter transporters |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [483-559] |
1 11 21 31 41 51
| | | | | |
1 MSINPSITMP DGVIHLYYIG YFYSFMTAFL IYWGLNLVFP AKETLLEEAV YPPKSNAELV 60
61 DPSTLSGKDK FWYYIDY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
