YRC Public Data Repository - Protein Structure Prediction

Protein:	SPBC146.04
Organism:	Schizosaccharomyces pombe
Length:	192 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC146.04.

Description	E-value	Query Range	Subject Range
gi\|67526603, gi\|... - gi\|67526603\|ref\|XP_661363.1\| hypothetical protein AN3759.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	216.0	[0..3]	[164..6]
gi\|70987121, gi\|... - gi\|70987121\|ref\|XP_749041.1\| FAD dependent sulfhydryl oxidase Erv2 [Aspergillus fumigatus Af293], gi... gi\|159123188 - gi\|159123188\|gb\|EDP48308.1\| FAD dependent sulfhydryl oxidase Erv2, putative [Aspergillus fumigatus A...	205.0	[0..3]	[172..6]
gi\|83765127 - gi\|83765127\|dbj\|BAE55270.1\| unnamed protein product [Aspergillus oryzae] gi\|169765602 - gi\|169765602\|ref\|XP_001817272.1\| hypothetical protein [Aspergillus oryzae RIB40]	195.0	[0..3]	[165..6]
gi\|145012964, gi... - gi\|39967985\|ref\|XP_365383.1\| conserved hypothetical protein [Magnaporthe grisea 70-15], gb\|EAA54100....	187.0	[0..7]	[175..9]
gi\|44981651, gi\|... - gi\|45185861\|ref\|NP_983577.1\| ACR175Wp [Ashbya gossypii ATCC 10895], gi\|44981651\|gb\|AAS51401.1\| ACR17... gi\|44981651 - gi\|44981651\|gb\|AAS51401.1\| ACR175Wp [Ashbya gossypii ATCC 10895]	186.0	[0..17]	[170..29]
gi\|58257431 - gi\|58257431\|gb\|AAW69337.1\| ERV2 protein-like protein [Magnaporthe grisea]	186.0	[0..7]	[175..9]
ERV1_ARATH - FAD-linked sulfhydryl oxidase ERV1 OS=Arabidopsis thaliana GN=ERV1 PE=1 SV=1	184.0	[0..17]	[175..24]
gi\|42552360, gi\|... - gi\|46122509\|ref\|XP_385808.1\| hypothetical protein FG05632.1 [Gibberella zeae PH-1], gi\|42552360\|gb\|E...	179.0	[0..27]	[173..44]

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Predicted Domain #1

Region A:
Residues: [1-192]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILNRRIQVI LPTLLILSFI IWIFHSVMVD KDWRLFMPEI KSLPDREGQG RKPIEMMSTK  60
   61 HDNNTNNLMV NAYWKLIHTV VSNYPNRPTL DERDILRHYL FSSAITMPCG EYSVELQKIL 120
  121 DVHPPQTSSR KAATTWACKV HNQLNEKMNQ PKTSCDGFNE RYVIGSPTYR ESEAENVPER 180
  181 VQVINEDHDY SG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	36.39794
Match:	1jr8A
Description:	Thiol oxidase Erv2p
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
thiol oxidase activity	4.68010407845224	bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors, oxygen as acceptor	4.42748389431225	bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors	4.03595213895773	bayes_pls_golite062009
flavin-linked sulfhydryl oxidase activity	2.03137109707129	bayes_pls_golite062009
binding	1.34964320340582	bayes_pls_golite062009
protein binding	0.661894111825388	bayes_pls_golite062009
catalytic activity	0.620866037386174	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: