| Protein: | kha1 (reserved) |
| Organism: | Schizosaccharomyces pombe |
| Length: | 898 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for kha1 (reserved).
| Description | E-value | Query Range |
Subject Range |
|
|
414.0 | [0..3] | [717..8] |
|
|
414.0 | [0..2] | [755..9] |
|
|
376.0 | [0..7] | [716..12] |
|
Region A: Residues: [1-431] |
1 11 21 31 41 51
| | | | | |
1 MTIFQISIGM STQSIFDGDN VVVYSASDPL LLFIVQAIII IALCRLIHIP LSFLQQPRVI 60
61 AEIIGGIVLG PTVMGRIPKF LDYIFPTSSM GPLNLVSNLG LVLFLFVIGM EVDLRVLVLN 120
121 YKVTLLVTVF SIVIPFGAGA GISAGLYKFT TREFEFGKFL LFISTAMSIT AFPVLARILS 180
181 ELHLLHKRVG VIVLSAGIGN DVIGWILLAL SVTLVNSGSG VRAVYILLLA LGWCLFLFIA 240
241 IKPLVYLLAV KTRSLKDKPS ESFICIVLSM VLVSAFFTDI IGIHPIFGGF LVGTIIPHEN 300
301 DLTVKITEKI EDLVNCLFLP LYFASSGLKT NISTLNTGKI WGYTIGTICV AIASKMGSSM 360
361 LAARILKMPW SDSLVVGSLM SCKGLVELIV LNIGLSTGIL NETIFSMFVF MAVITTFVTT 420
421 PMTKFFLRFT K
|
| Detection Method: |  |
| Confidence: | 46.39794 |
| Match: | 1fftA |
| Description: | Cytochrome O ubiquinol oxidase, subunit I |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [432-594] |
1 11 21 31 41 51
| | | | | |
1 SEHDDNSIES SEELVQYLPE LPTRLSFLIN HPLDASAAMI FIQHIYENRD KVSGCLHLPQ 60
61 IIIHSIWTLF VDSRTSNLLR ASQVDNKVEN EALMGLFETF VKIKKFEYES NALLVSGTGY 120
121 YNVVLETLKK SSSNILIMPY LKDYKTIENE SSSSPLSLSS IRL
|
| Detection Method: | |
| Confidence: | 6.30103 |
| Match: | 1lnqA |
| Description: | Potassium channel-related protein MthK |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [595-739] |
1 11 21 31 41 51
| | | | | |
1 ALGDSFKSLD ELIPLIKMAR IPVGVFFTRN PHNLSVKKIR PIIRSTEYGS PKNDFEQLEK 60
61 DKKSFDQVEI SVKEKGSTYE RSKVVILIYL GTENDLIALE LLLKFLYEET SIAYIYTYDE 120
121 FYKDDYATSL PNVVYTSEVL LSKHN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.671 | d.81.1 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |
| View | Download | 0.665 | c.46.1 | Rhodanese/Cell cycle control phosphatase |
| View | Download | 0.639 | c.24.1 | Methylglyoxal synthase-like |
| View | Download | 0.622 | c.24.1 | Methylglyoxal synthase-like |
| View | Download | 0.614 | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
| View | Download | 0.609 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.604 | c.25.1 | Ferredoxin reductase-like, C-terminal NADP-linked domain |
| View | Download | 0.600 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.558 | c.26.2 | Adenine nucleotide alpha hydrolases-like |
|
Region A: Residues: [740-898] |
1 11 21 31 41 51
| | | | | |
1 DSAFKVWPKL RKNIRKITKP NGFTTDQHSQ TFIPSQTHTK LDLRLSDVTD SVRSRINVVK 60
61 FGNLNSLLSC LHELIQPATL TPSFETEKSI TMFLGCRDKQ AVSEKLEVAA LSEMKKLGYI 120
121 ESSSEFGMLA GLIPLVLLSN FPLIDFFLGK APTKMVQGY
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
