YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC26H5.13c
Organism:	Schizosaccharomyces pombe
Length:	236 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC26H5.13c.

Description	E-value	Query Range	Subject Range
KEI1 - Component of inositol phosphorylceramide (IPC) synthase; forms a complex with Aur1p and regulates it... gi\|151942339 - gi\|151942339\|gb\|EDN60695.1\| conserved protein [Saccharomyces cerevisiae YJM789] KEI1_YEAST - Inositol phosphorylceramide synthase regulatory subunit KEI1 OS=Saccharomyces cerevisiae (strain ATC...	226.0	[0..16]	[179..6]
gi\|32408225, gi\|... - gi\|32408225\|ref\|XP_324594.1\| hypothetical protein [Neurospora crassa], gi\|28923592\|gb\|EAA32765.1\| pr... gi\|85105610 - gi\|85105610\|ref\|XP_962001.1\| hypothetical protein NCU05237 [Neurospora crassa OR74A]	225.0	[0..14]	[179..7]
gi\|40742991, gi\|... - gi\|67901228\|ref\|XP_680870.1\| hypothetical protein AN7601.2 [Aspergillus nidulans FGSC A4], ref\|XP_41...	218.0	[0..9]	[179..3]
gi\|114195686, gi... - gi\|115388193\|ref\|XP_001211602.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	205.0	[0..9]	[179..3]
gi\|46111199, gi\|... - gi\|46111199\|ref\|XP_382657.1\| hypothetical protein FG02481.1 [Gibberella zeae PH-1], gi\|42547713\|gb\|E...	205.0	[0..11]	[179..5]
gi\|45190859, gi\|... - gi\|45190859\|ref\|NP_985113.1\| AER256Cp [Ashbya gossypii ATCC 10895], gi\|44983901\|gb\|AAS52937.1\| AER25... gi\|44983901 - gi\|44983901\|gb\|AAS52937.1\| AER256Cp [Ashbya gossypii ATCC 10895]	203.0	[0..18]	[178..29]
gi\|159129948 - gi\|159129948\|gb\|EDP55062.1\| conserved hypothetical protein [Aspergillus fumigatus A1163] gi\|71002424, gi\|... - gi\|71002424\|ref\|XP_755893.1\| conserved hypothetical protein [Aspergillus fumigatus Af293], gi\|668535...	201.0	[0..9]	[179..3]
gi\|49524189, gi\|... - gi\|50284919\|ref\|XP_444887.1\| hypothetical protein CAGL0A02794g [Candida glabrata CBS138], gi\|4952418... gi\|49524189 - gi\|49524189\|emb\|CAG57780.1\| unnamed protein product [Candida glabrata]	184.0	[0..12]	[179..2]

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Predicted Domain #1

Region A:
Residues: [1-236]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALFRRPNWS ALFEKIFIQK SFLGFCSLRV GCEIIIWFAI INKVSGLYGI VSLFQNSDAS  60
   61 PWQVLMYVSS VLMLILFSWL AIHIPKSSVP HALILFYVYL IDFLLNVLFT VLFALSWFSK 120
  121 LVQSDSSSTE ESADSDPSPS LLYLFFQAES IPSLLLLIFF ASLKFYFVLI TLSYSNKLIV 180
  181 DSGIRPQNLP PNFSGRVTRL LMKPYIMAAN RSYLRNHTKR FTDSIELEQR LMDEVV

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	81.568636
Match:	PF08552.2
Description:	No description for PF08552.2 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits