YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC750.08c
Organism:	Schizosaccharomyces pombe
Length:	228 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC750.08c.

Description	E-value	Query Range	Subject Range
MAOX_VITVI - NADP-dependent malic enzyme OS=Vitis vinifera PE=2 SV=1	333.0	[0..1]	[227..373]
gi\|27530932 - gi\|27530932\|dbj\|BAC54101.1\| cytosolic NADP-malic enzyme [Lithospermum erythrorhizon]	327.0	[0..1]	[227..359]
gi\|46850204 - gi\|46850204\|gb\|AAT02535.1\| NADP-dependent malic enzyme 3 [Hydrilla verticillata]	327.0	[0..1]	[227..357]
gi\|115439655, gi... - gi\|115439655\|ref\|NP_001044107.1\| Os01g0723400 [Oryza sativa (japonica cultivar-group)], gi\|113533638...	326.0	[0..1]	[227..374]
MAOC_MAIZE - NADP-dependent malic enzyme, chloroplastic OS=Zea mays GN=MOD1 PE=1 SV=1	323.0	[0..1]	[227..418]
gi\|15077109 - gi\|15077109\|gb\|AAK83074.1\|AF288921_1 putative cytosolic NADP-malic enzyme [Flaveria pringlei]	323.0	[0..1]	[227..371]

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Predicted Domain #1

Region A:
Residues: [1-228]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DRCGLLLERH AKIATDGQKP FLKKDSDFKE VPSGDIDLET AISLIKPTVL LGCSGQPGKF  60
   61 TEKAIREMSK HVKHPIIFPI SNPTTLMEAK PVQIDEWSNG KALMATGSPL PPLTRNGKEY 120
  121 VISQCNNALL YPALGVACVL SRCKLLSDGM LKAASDALAT VPRSLFVADE ALLPDLDNAR 180
  181 EISRHIVFAV LKQAISEGMS TVDLPKDDAK LKEWIIEREW NPEYRNFV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	76.154902
Match:	2aw5A
Description:	Crystal structure of a human malic enzyme
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits