YRC Public Data Repository - Protein Structure Prediction

Protein:	exg3
Organism:	Schizosaccharomyces pombe
Length:	464 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for exg3.

Description	E-value	Query Range	Subject Range
gi\|46096280, gi\|... - gi\|71003189\|ref\|XP_756275.1\| hypothetical protein UM00128.1 [Ustilago maydis 521], ref\|XP_397743.1\| ...	286.0	[0..2]	[438..36]
gi\|49093456, gi\|... - gi\|67527343\|ref\|XP_661656.1\| hypothetical protein AN4052.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	268.0	[0..3]	[370..99]
orf19.7214 - orf19.7214 CGDID:CAL0003768 Assembly 19, Contig19-2507 (16143, 17651) CDS, translated using codon ta... gi\|68481995, gi\|... - gi\|68481995\|ref\|XP_715015.1\| hypothetical protein CaO19.7214 [Candida albicans SC5314], gi\|46436617\|...	263.0	[0..8]	[447..35]
gi\|44980765 - gi\|44980765\|gb\|AAS50670.1\| ABL101Cp [Ashbya gossypii ATCC 10895] gi\|44980765, gi\|... - gi\|45185129\|ref\|NP_982846.1\| ABL101Cp [Ashbya gossypii ATCC 10895], gi\|44980765\|gb\|AAS50670.1\| ABL10...	261.0	[0..3]	[448..30]
gi\|50425647, gi\|... - gi\|50425647\|ref\|XP_461420.1\| hypothetical protein DEHA0F26378g [Debaryomyces hansenii CBS767], gi\|49...	244.0	[0..8]	[447..32]
YBR056W - Putative cytoplasmic protein of unknown function gi\|190408781 - gi\|190408781\|gb\|EDV12046.1\| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] YBQ6_YEAST - Uncharacterized glycosyl hydrolase YBR056W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) ...	244.0	[0..3]	[445..35]
EXG_ASPOR, EXGA_... - Glucan 1,3-beta-glucosidase OS=Aspergillus oryzae GN=exg1 PE=1 SV=1, Glucan 1,3-beta-glucosidase A O... EXGA_ASPOR - Glucan 1,3-beta-glucosidase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=exgA PE=1 SV=1 EXGA_ASPFN - Probable glucan 1,3-beta-glucosidase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL...	242.0	[0..2]	[369..19]
gi\|49650630 - gi\|49650630\|emb\|CAG80367.1\| YALI0E34155p [Yarrowia lipolytica] gi\|49650630, gi\|... - gi\|50554705\|ref\|XP_504761.1\| YALI0E34155p [Yarrowia lipolytica], gi\|49650630\|emb\|CAG80367.1\| unnamed...	240.0	[0..4]	[447..205]
gi\|477043 - gi\|477043\|pir\|\|A47702 glucan 1,3-beta-glucosidase (EC 3.2.1.58) - yeast (Candida albicans)	236.0	[0..2]	[369..41]

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Predicted Domain #1

Region A:
Residues: [1-354]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLNKQDLYI YRKQYGVNLG AWFCAERWIN DFLFTGEGSS ELEAVSGNVK AHGIDKAREN  60
   61 FEAHWKSWIG IEDFSYMKQH LVNSVRIPLG YWSLGNDELV KGTPFEPYAE VYRNSLHILC 120
  121 EKIQEAGSLS IGVLLDFHGV YGGGNCDGHS GTSSGKAEFY EKQEYQDRTV EAVKFLSSKI 180
  181 GQFENVIGIQ VINEPIWGQY DVLANFYQKA RSVVPSYLPV YIGDGWDKDH WVNWVNDHES 240
  241 EGFYVVDHHS YFCFGGELCH APPKLITRRL DTGEEYGKTK LSNIVIGEWS CTLSQESWSQ 300
  301 TKLHDKRRRD FGEAQLNQYL NYCGGCFFWT YKFLHGKGGD WDFRSVVEDK VINY

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	59.69897
Match:	2pb1A
Description:	No description for 2pb1A was found.

Predicted Domain #2

Region A:
Residues: [355-464]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPPPPTENKA MPALLEQSRD QNFGGHCYYW DQKQHDHPYE HDLYVKGWNQ AWEDYIEFLQ  60
   61 HGAMIGFPRA WTQKRMTSIS SASAWEYRDG MNAAWLHLER MGFLNPFRHP

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits