| Protein: | rhp14 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 289 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rhp14.
| Description | E-value | Query Range |
Subject Range |
|
|
306.0 | [0..3] | [288..1847] |
|
|
298.0 | [0..14] | [289..46] |
|
|
289.0 | [0..2] | [289..16] |
|
|
285.0 | [0..2] | [289..16] |
|
|
285.0 | [0..2] | [289..16] |
|
Region A: Residues: [1-54] |
1 11 21 31 41 51
| | | | | |
1 MENSSIVKSP NPTIEEQRNE IEKLKNLTGI EEVHVDGAKV NKRKRTFDEQ SEIT
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.694 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.553 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.471 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.417 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.404 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.388 | N/A | N/A | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.360 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.352 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.350 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.328 | N/A | N/A | a.4.1 | Homeodomain-like |
|
Region A: Residues: [55-223] |
1 11 21 31 41 51
| | | | | |
1 KDYIEYDFSK IEDTKGGYLL EEKKVEDLRE KPAERELREQ EERQKKLRLA PLNLDPETAP 60
61 KCFECDSIEL DTKYFDIFHC RVCHTCREKY PDKYSLLTKT ECKLDYLLTE PELQDQELLP 120
121 RLLKANPHQQ GWSNMMLYLR YQVEEFAKKK WGSMEALDAE FERREVQKK
|
| Detection Method: | |
| Confidence: | 40.30103 |
| Match: | 1xpaA |
| Description: | SOLUTION STRUCTURE OF THE DNA-AND RPA-BINDING DOMAIN OF THE HUMAN REPAIR FACTOR XPA, NMR, 1 STRUCTURE |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [224-289] |
1 11 21 31 41 51
| | | | | |
1 EMKEKKFEKQ LLELRKRTRT SNYSRMSIRE KRKHVHSYDE EFEKPNEPGV IVQRCKCGLE 60
61 IEQLEI
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
