YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC7D4.05
Organism:	Schizosaccharomyces pombe
Length:	225 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC7D4.05.

Description	E-value	Query Range	Subject Range
gi\|88795676, gi\|... - gi\|88795676\|ref\|ZP_01111369.1\| phosphoglycolate phosphatase [Alteromonas macleodii 'Deep ecotype'], ...	146.0	[0..7]	[223..3]
GPH_SALPA - Phosphoglycolate phosphatase OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=SPA3347 PE=3 S... GPH_SALPA - Phosphoglycolate phosphatase OS=Salmonella paratyphi A GN=SPA3347 PE=3 SV=1 gi\|197095805, gi... - gi\|197364328\|ref\|YP_002143965.1\| phosphoglycolate phosphatase [Salmonella enterica subsp. enterica s...	142.0	[0..4]	[223..1]
gi\|218362698, gi... - gi\|218555930\|ref\|YP_002388843.1\| phosphoglycolate phosphatase [Escherichia coli IAI1], gi\|218362698\|... gi\|192957860, gi... - gi\|75236986\|ref\|ZP_00721042.1\| COG0546: Predicted phosphatases [Escherichia coli E110019], gi\|193068...	142.0	[0..4]	[222..1]
gi\|157158678, gi... - gi\|75188159\|ref\|ZP_00701426.1\| COG0546: Predicted phosphatases [Escherichia coli E24377A], gi\|157158...	142.0	[0..4]	[222..1]
gi\|191171581, gi... - gi\|75241525\|ref\|ZP_00725370.1\| COG0546: Predicted phosphatases [Escherichia coli F11], gi\|191171581\|... gi\|110345211, gi... - gi\|110643619\|ref\|YP_671349.1\| phosphoglycolate phosphatase [Escherichia coli 536], gi\|110345211\|gb\|A...	142.0	[0..4]	[222..1]
gi\|115514777, gi... - gi\|117625653\|ref\|YP_858976.1\| phosphoglycolate phosphatase [Escherichia coli APEC O1], gi\|115514777\|... gi\|91212857, gi\|... - gi\|91212857\|ref\|YP_542843.1\| phosphoglycolate phosphatase [Escherichia coli UTI89], gi\|91074431\|gb\|A... GPH_ECOL6 - Phosphoglycolate phosphatase OS=Escherichia coli O6 GN=c4155 PE=3 SV=1 GPH_ECOL6 - Phosphoglycolate phosphatase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=c4155... gi\|218367211, gi... - gi\|218560442\|ref\|YP_002393355.1\| phosphoglycolate phosphatase [Escherichia coli S88], gi\|218367211\|e... gi\|226902376, gi... - gi\|237703112\|ref\|ZP_04533593.1\| phosphoglycolate phosphatase [Escherichia sp. 3_2_53FAA], gi\|2269023... gi\|227883515, gi... - gi\|227883515\|ref\|ZP_04001320.1\| phosphoglycolate phosphatase [Escherichia coli 83972], gi\|227839394\|...	142.0	[0..4]	[222..1]
gi\|75516147, gi\|... - gi\|75516147\|ref\|ZP_00738265.1\| COG0546: Predicted phosphatases [Escherichia coli 53638], gi\|18849334... gi\|157162861, gi... - gi\|75197316\|ref\|ZP_00707386.1\| COG0546: Predicted phosphatases [Escherichia coli HS], gi\|157162861\|r... gi\|226839055, gi... - gi\|254038549\|ref\|ZP_04872605.1\| phosphoglycolate phosphatase [Escherichia sp. 1_1_43], gi\|226839055\|... gi\|209756690, gi... - pir\|\|C91157 phosphoglycolate phosphatase [imported] - Escherichia coli (strain O157:H7, substrain R... gi\|254795299, gi... - gi\|254795299\|ref\|YP_003080136.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. TW14359... gi\|209397865, gi... - gi\|209397865\|ref\|YP_002272819.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4115]... gi\|15803888, gi\|... - gi\|15803888\|ref\|NP_289924.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 EDL933], gi\|1251... gi\|208741353, gi... - gi\|208821230\|ref\|ZP_03261550.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4042],... gi\|217325172, gi... - gi\|217325172\|ref\|ZP_03441256.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. TW14588]... gi\|124500814, gi... - gi\|124528159\|ref\|ZP_01699492.1\| phosphoglycolate phosphatase [Escherichia coli B], gi\|124500814\|gb\|E... gi\|168779465, gi... - gi\|189002264\|gb\|EDU71250.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4076], gi\|... gi\|168772727, gi... - gi\|187771456\|gb\|EDU35300.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4196], gi\|... gi\|168797152, gi... - gi\|189380127\|gb\|EDU98543.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC508], gi\|1... gi\|168785186, gi... - gi\|189374428\|gb\|EDU92844.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC869], gi\|1... gi\|195934873 - gi\|195934873\|ref\|ZP_03080255.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4024] GPH_ECO57 - Phosphoglycolate phosphatase OS=Escherichia coli O157:H7 GN=gph PE=3 SV=1 gi\|15833481, gi\|... - gi\|15833481\|ref\|NP_312254.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. Sakai], gi\|... gi\|170018379, gi... - gi\|170018379\|ref\|YP_001723333.1\| phosphoglycolate phosphatase [Escherichia coli ATCC 8739], gi\|16975... gi\|208814054, gi... - gi\|208814054\|ref\|ZP_03255383.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4045],... gi\|208727293, gi... - gi\|208807492\|ref\|ZP_03249829.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4206],... gi\|189359166, gi... - gi\|189359166\|gb\|EDU77585.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4401], gi\|... gi\|168751804, gi... - gi\|188014205\|gb\|EDU52327.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4113], gi\|... gi\|189364353, gi... - gi\|189364353\|gb\|EDU82772.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4486], gi\|... gi\|168759406, gi... - gi\|189369601\|gb\|EDU88017.1\| phosphoglycolate phosphatase [Escherichia coli O157:H7 str. EC4501], gi\|...	142.0	[0..4]	[222..1]
GPH_SALTI - Phosphoglycolate phosphatase OS=Salmonella typhi GN=gph PE=3 SV=1 GPH_SALTI - Phosphoglycolate phosphatase OS=Salmonella typhi GN=gph PE=3 SV=1 gi\|16762805 - gi\|16762805\|ref\|NP_458422.1\| phosphoglycolate phosphatase [Salmonella enterica subsp. enterica serov...	142.0	[0..4]	[223..1]
gi\|29144292, gi\|... - gi\|29144292\|ref\|NP_807634.1\| phosphoglycolate phosphatase [Salmonella enterica subsp. enterica serov... gi\|213865259 - gi\|213865259\|ref\|ZP_03387378.1\| phosphoglycolate phosphatase [Salmonella enterica subsp. enterica se... gi\|214000218 - gi\|214000218\|ref\|ZP_03410953.1\| phosphoglycolate phosphatase [Salmonella enterica subsp. enterica se... gi\|213426748 - gi\|213426748\|ref\|ZP_03359498.1\| phosphoglycolate phosphatase [Salmonella enterica subsp. enterica se... gi\|213648701 - gi\|213648701\|ref\|ZP_03378754.1\| phosphoglycolate phosphatase [Salmonella enterica subsp. enterica se...	142.0	[0..4]	[223..1]
gi\|110616765, gi... - gi\|110807217\|ref\|YP_690737.1\| phosphoglycolate phosphatase [Shigella flexneri 5 str. 8401], gi\|11061...	142.0	[0..4]	[222..1]

Back

Predicted Domain #1

Region A:
Residues: [1-225]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPSKNIQKI KLVTFDAFGT ILHLSKPVPI VYSEVAQKYG VHATIDEIEH NTFKDFSEKH  60
   61 KNHGKKSGLN PHDWWIKVIE HSFPTPVPAE MAEELWSYFS KKTGYTIHPL LIDFLKRNKE 120
  121 ERKYIIGIIS NTDERIRTVL EDYGIDHLID IYAFSYDVGF EKPSREIFDY AMEKAVKLLG 180
  181 QEIQPEECMH LGDDLIKDVS AARNIQWNAE YCDIKTNFLK YFEQK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	32.39794
Match:	2hszA
Description:	No description for 2hszA was found.

Predicted functions:

Term	Confidence	Notes
binding	0.660822867191303	bayes_pls_golite062009
hydrolase activity	0.194960782858734	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: