YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC4F10.10c
Organism:	Schizosaccharomyces pombe
Length:	337 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC4F10.10c.

Description	E-value	Query Range	Subject Range
gi\|71002490, gi\|... - gi\|71002490\|ref\|XP_755926.1\| aminonitrophenyl propanediol resistance protein [Aspergillus fumigatus ...	520.0	[0..40]	[337..248]
gi\|40745047, gi\|... - gi\|67523407\|ref\|XP_659763.1\| hypothetical protein AN2159.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	517.0	[0..46]	[337..383]
gi\|39979135 - gi\|39979135\|emb\|CAE85509.1\| probable ANP1 protein [Neurospora crassa]	515.0	[0..40]	[337..48]
gi\|46116872, gi\|... - gi\|46116872\|ref\|XP_384454.1\| hypothetical protein FG04278.1 [Gibberella zeae PH-1], gi\|42550761\|gb\|E...	512.0	[0..14]	[337..46]
gi\|68483258, gi\|... - gi\|68483258\|ref\|XP_714464.1\| hypothetical protein CaO19.3622 [Candida albicans SC5314], gi\|68483157\|... orf19.11105, orf... - ANP1 CGDID:CAL0000337 Assembly 19, Contig19-10184 (60170, 58884) CDS, reverse complemented, translat...	512.0	[0..22]	[337..18]
gi\|115388283, gi... - gi\|115388283\|ref\|XP_001211647.1\| mannan polymerase II complex ANP1 subunit [Aspergillus terreus NIH2...	507.0	[0..46]	[337..89]
gi\|83770295 - gi\|83770295\|dbj\|BAE60428.1\| unnamed protein product [Aspergillus oryzae] gi\|169762734 - gi\|169762734\|ref\|XP_001727267.1\| hypothetical protein [Aspergillus oryzae RIB40]	505.0	[0..29]	[337..46]
ANP1_SCHPO - Mannan polymerase II complex anp1 subunit OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=... SPBC1734.04 - mannosyltransferase complex subunit, Anp family	505.0	[0..29]	[337..64]
gi\|13810759 - gi\|13810759\|gb\|AAK40024.1\|AF264786_1 Mnn9p [Pichia angusta]	501.0	[0..41]	[337..50]
gi\|44984904 - gi\|44984904\|gb\|AAS53728.1\| AFR357Wp [Ashbya gossypii ATCC 10895] gi\|45198875, gi\|... - gi\|45198875\|ref\|NP_985904.1\| AFR357Wp [Ashbya gossypii ATCC 10895], gi\|44984904\|gb\|AAS53728.1\| AFR35...	500.0	[0..6]	[337..3]

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Predicted Domain #1

Region A:
Residues: [1-337]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVYNKSRIV GQLLFVALGI TFIYYLFTPS VNSNAKVQIE NRGGNSYEIY DMNKITESSD  60
   61 PIRNKEEVLI LTPIARFYPQ YWKNLLELDY PRNLISLGFI VPSSKDGAKV HRELRNAINA 120
  121 VQKGPGDKRF ADVKILIQDS DLSSGQSEAE RHKFSAQKER RGKLAATRNT LLLSTLKPST 180
  181 SWVLWLDSDI VETPSTLIQD LAEHNEDVLV ANCFQKQGDK LTPYDFNSWV DSQTAQELAS 240
  241 HMDRDEILLE GYAELPTYRM LMAKIYEEHK DPSTIMALDG VGTTALLVKA SVHRDGALFP 300
  301 TFPFYHLIES EGFAKMAKRL GHGVYGLPYY LVFHHNE

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	1.21
Match:	1xhbA
Description:	The Crystal Structure of UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferase-T1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
UDP-glycosyltransferase activity	6.01354989568484	bayes_pls_golite062009
acetylgalactosaminyltransferase activity	5.66606808201136	bayes_pls_golite062009
polypeptide N-acetylgalactosaminyltransferase activity	5.60505224219681	bayes_pls_golite062009
mannosyltransferase activity	5.1732667004955	bayes_pls_golite062009
transferase activity, transferring glycosyl groups	4.21261757812439	bayes_pls_golite062009
transferase activity, transferring hexosyl groups	4.02812104984198	bayes_pls_golite062009
alpha-1,2-mannosyltransferase activity	3.3757785630345	bayes_pls_golite062009
transferase activity	2.3313878748424	bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups	1.79751747857925	bayes_pls_golite062009
catalytic activity	1.73979371332125	bayes_pls_golite062009
nucleotidyltransferase activity	1.47767908405723	bayes_pls_golite062009
N-acetyllactosamine synthase activity	0.925872529464618	bayes_pls_golite062009
lactose synthase activity	0.925872529464618	bayes_pls_golite062009
alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity	0.386636074342689	bayes_pls_golite062009
binding	0.165472828059574	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: