YRC Public Data Repository - Protein Structure Prediction

Protein:	oac1
Organism:	Schizosaccharomyces pombe
Length:	320 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for oac1.

Description	E-value	Query Range	Subject Range
gi\|74006830 - gi\|74006830\|ref\|XP_537947.2\| PREDICTED: similar to ADP/ATP translocase 3 (Adenine nucleotide translo...	290.0	[0..17]	[314..174]
gi\|62089230 - gi\|62089230\|dbj\|BAD93059.1\| ADP,ATP carrier protein, liver isoform T2 variant [Homo sapiens]	283.0	[0..6]	[314..16]
gi\|114597246 - gi\|114597246\|ref\|XP_517556.2\| PREDICTED: solute carrier family 25 (mitochondrial carrier; adenine nu...	283.0	[0..23]	[313..210]
gi\|68366574 - gi\|68366574\|ref\|XP_694733.1\| PREDICTED: similar to ADP,ATP carrier protein 2 (ADP/ATP translocase 2)...	281.0	[0..18]	[315..17]
ADT3_BOVIN - ADP/ATP translocase 3 OS=Bos taurus GN=SLC25A6 PE=1 SV=3	280.0	[0..17]	[314..2]
gi\|53127328, gi\|... - gi\|57530120\|ref\|NP_001006443.1\| solute carrier family 25 (mitochondrial carrier; adenine nucleotide ...	278.0	[0..17]	[313..2]

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Predicted Domain #1

Region A:
Residues: [1-320]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEKQTIKAL PAHNPTQVKK LGPVSGFLSG GLAACGAVTL TNPFEVIKTR FQLQGQLTKL  60
   61 DPSKRIYKSV GQAFSLIARH EGIRGLQRGL GTAYVYQICL NGCRLGFYEP IRRTLNTWFL 120
  121 DDPKGNKLAI NVASGAGSGL CGALFGSPFF LVKTRMQSYS PKFPVGQQYG YKHIFNAFSR 180
  181 IIKENGVKGL FVGADAAILR TVSGSSVQLP IYNWAKRMIE HYNLLEEGMI KHLTASAVSG 240
  241 FGVCCTMQIF DTVMTRMYNQ KNKELYKNPI DCILKTIRSE GFFALYKGFG AHLARIAPHT 300
  301 IFCLTFVEQT NKLFLKFQKD

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	75.0
Match:	1okcA
Description:	structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits