| Protein: | SPCC162.02c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 981 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC162.02c.
| Description | E-value | Query Range |
Subject Range |
|
|
687.0 | [0..1] | [970..520] |
|
|
683.0 | [0..1] | [970..1545] |
|
|
674.0 | [0..1] | [970..1539] |
|
|
674.0 | [0..1] | [964..1558] |
|
|
673.0 | [0..1] | [966..439] |
|
|
671.0 | [0..1] | [962..554] |
|
|
668.0 | [0..1] | [968..437] |
|
|
660.0 | [0..1] | [964..441] |
|
Region A: Residues: [1-531] |
1 11 21 31 41 51
| | | | | |
1 MLCDSSESVS FSSISKEEDT PIARLLKNAK ETPDHRFISV YNERGIVAKY TYTELLRRVN 60
61 TIAKFCDDLG LGKTVGIHMG HELDFLCSIF ALWATGRTCV IFNQIWSQQV VRVLVKRLNI 120
121 SDLLYHEYKP KFEVDTLNAT SLASLPLDID APCIRAGLEP EVALINHSSG STGVPKSMPF 180
181 LMKKYALGYD YGTPEFMNHL STPMVMATSF ALTTLSWINA LYCNGNLLYP SSSISATCTS 240
241 EAERLAWNVY YALRAGCERL IILPNLLVLT LQIMPDKEEC FPACKLVAAG GEMVPANMYH 300
301 TCKRVLPNAT IYPQYGTTES GLVSFLAYNG KDTLHNKELV YFPGKTVKKL MLVTEDNEAV 360
361 PEKIGCEGFV CVVTDVQSEP YVGDDAETIQ SRNSTFINYD GQPAVRFADL AVWNSYKGKL 420
421 GITIKGRLGR RVKRNGVFFD LKYFDQVVVG LKEVKDAFSF FIFNRFVLVY VPAYNGVDPV 480
481 TLKQKLNKEL RDHHLFSSCF PLADIPRNAA GKVDLKSIET YASKCLSVED Q
|
| Detection Method: |  |
| Confidence: | 121.0 |
| Match: | 1amuA |
| Description: | Phenylalanine activating domain of gramicidin synthetase 1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.06902368506559 | bayes_pls_golite062009 |
| ligase activity | 0.763554068965808 | bayes_pls_golite062009 |
| ligase activity, forming carbon-sulfur bonds | 0.619465698462354 | bayes_pls_golite062009 |
| binding | 0.152749814081137 | bayes_pls_golite062009 |
|
Region A: Residues: [532-981] |
1 11 21 31 41 51
| | | | | |
1 RLPVLLNPVA IEISKIASKI LQNPSLEGKD APLYSCGLDS IHSVRFFHAI QSHFHLEGPI 60
61 RYNMNSNCTP NSIASIIQKK SYNVSSITYE LLNEDACALS RTIPKLSILP TNGQYFLLTG 120
121 ATGYFGRRFL EYLVKLNISV VCLVRESSDE AAKERLISLV PSLRISSENI IVWAAHVEEI 180
181 RFGLDDAKWE FLVENVSRIY HMAAEVHWMK SYQELRPANV LGTKTVLELS VMGPKALYFI 240
241 SGGGQQEVEL DDDTQSAKAS GYALSKYVAE LLCRKISDLG HPLIYVIRPG FIIANDGEIL 300
301 SRDFFWRFVA TALRMGIWPQ SDESQSLVFH ISTTDALCMT LTQILEKEAD AYAPLLAYDK 360
361 FDGDEFACIC ESMKNVKLDF VTLEDWLKAL EKDVDEKGED HPLFALQHAT KFALKSSMTP 420
421 SNGLRNIYPL SETFLTKEAI ANGLENLYIE
|
| Detection Method: | |
| Confidence: | 26.69897 |
| Match: | 1z7eA |
| Description: | Crystal structure of full length ArnA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| catalytic activity | 1.03099072397093 | bayes_pls_golite062009 |
