| Protein: | SPBC16E9.02c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 569 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC16E9.02c.
| Description | E-value | Query Range |
Subject Range |
|
|
180.0 | [0..3] | [566..519] |
|
|
173.0 | [0..9] | [561..50] |
|
|
166.0 | [0..5] | [566..499] |
|
|
165.0 | [0..3] | [566..491] |
|
Region A: Residues: [1-129] |
1 11 21 31 41 51
| | | | | |
1 MASEQSNPRL PRRPPYMAEK ARATLKEAFP NTDDAIIRAV LAASGYKLEP AFNALLGLSD 60
61 PQVAEEMEQA ETSYAYDTAA HDDPVQRQLE EDERCARELA NRYNSHRPER RRKTNNDRRN 120
121 YPPQNRTAK
|
| Detection Method: |  |
| Confidence: | 3.12 |
| Match: | 2dhyA |
| Description: | No description for 2dhyA was found. |
|
Region A: Residues: [130-332] |
1 11 21 31 41 51
| | | | | |
1 PNDNDGDDYS FFEDDLPVIK DTFMRGFQSF KQRSMEWVEN IASKFDGEEE DDDDEKYSAP 60
61 SKIYPSPRRS TAATLESAYE ERPPSLPRRK PSRPGTAITL PPYESDPHML NEKDFERLRL 120
121 ESSSSPMMRR SSLNSNRRSV ESSSSAAFVE GQSFILDSNG AIEVANSAFA LDDSDLESAY 180
181 NEELEMKKDT SKPTASTKEV VVE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [333-569] |
1 11 21 31 41 51
| | | | | |
1 KKPDESRKQA ARTLETVSEE QMGSSNAKSK VLTSEPKDST SVEAEKTETD EPAVGKGASD 60
61 VSDTAEISEK TEAKNADSEA NLEEKSDVGE EKESKDENNK ASLHKDVEEK DTKITNEDTG 120
121 KTETDVKAKE TDSIEANDKD EKTDSKETED KVEETESKEA DVKAKETDSI EVDDKEEKTD 180
181 SKETADKVEQ TDSKDTNEKP AKDDNKEANE KAEKVDSKDV KEKIEEAADL QNSGKET
|
| Detection Method: | |
| Confidence: | 3.69897 |
| Match: | 1c1gA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
