YRC Public Data Repository - Protein Structure Prediction

Protein:	meu14
Organism:	Schizosaccharomyces pombe
Length:	335 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for meu14.

Description	E-value	Query Range	Subject Range
gi\|67538094, gi\|... - gi\|67538094\|ref\|XP_662821.1\| hypothetical protein AN5217.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	395.0	[0..2]	[298..24]
gi\|85119602 - gi\|85119602\|ref\|XP_965671.1\| hypothetical protein [Neurospora crassa OR74A] gi\|32422591, gi\|... - gi\|32422591\|ref\|XP_331739.1\| hypothetical protein [Neurospora crassa], gi\|28927483\|gb\|EAA36435.1\| hy...	390.0	[0..5]	[299..43]
gi\|38109642, gi\|... - gi\|39958776\|ref\|XP_364441.1\| hypothetical protein MG09286.4 [Magnaporthe grisea 70-15], gb\|EAA55479....	382.0	[0..1]	[276..65]
gi\|238484913, gi... - gi\|238484913\|ref\|XP_002373695.1\| cell wall integrity signaling protein Lsp1/Pil1, putative [Aspergil... gi\|171704179, gi... - gi\|171704179\|dbj\|BAG16417.1\| hypothetical protein [Aspergillus oryzae RIB40], gi\|169767974\|ref\|XP_00... gi\|83766313 - gi\|83766313\|dbj\|BAE56456.1\| unnamed protein product [Aspergillus oryzae]	382.0	[0..2]	[298..23]
gi\|90299667, gi\|... - gi\|90299667\|gb\|EAS29298.1\| hypothetical protein CIMG_08044 [Coccidioides immitis RS], gi\|119178416\|r... gi\|240104855 - gi\|240104855\|gb\|EER23050.1\| sphingolipid long chain base-responsive protein PIL1, putative [Coccidio...	376.0	[0..2]	[298..24]
gi\|115390693, gi... - gi\|115390693\|ref\|XP_001212851.1\| sphingolipid long chain base-responsive protein PIL1 [Aspergillus t...	369.0	[0..2]	[326..24]
gi\|66848276, gi\|... - gi\|70991589\|ref\|XP_750643.1\| cell wall integrity signaling protein Lsp1/Pil1 [Aspergillus fumigatus ... gi\|159124203 - gi\|159124203\|gb\|EDP49321.1\| cell wall integrity signaling protein Lsp1, putative [Aspergillus fumiga...	364.0	[0..2]	[252..24]
gi\|111071151 - gi\|111071151\|gb\|EAT92271.1\| hypothetical protein SNOG_00776 [Phaeosphaeria nodorum SN15]	362.0	[0..6]	[298..22]
gi\|46108036, gi\|... - gi\|46108036\|ref\|XP_381076.1\| hypothetical protein FG00900.1 [Gibberella zeae PH-1], gi\|42545032\|gb\|E...	360.0	[0..11]	[313..29]

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Predicted Domain #1

Region A:
Residues: [1-335]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKSSNLKMQ RKGSLRENGL VKGLNKNKFS ISKLKELSHA DDSRKSHRII RSGKSSGEAY  60
   61 KQAGKGLMNL GNHLSDWGAK SSNLSLNDIS DKIGVLVSEL GETEIEFVKA FNENRIKFKA 120
  121 IRAMEDSIAP SRAHRQRLIS SIEREEERDP LSPKLTDLQN QLVRTEAENL VGEMQLDNTS 180
  181 REVFKSSFQG LMDAFQLRAQ KQMTLSYYAS QLAELINDEV AYPGDNPAAY SQKYATQIMH 240
  241 QCVESMARLL APVTSETTEH VGSDCEFTRK SSSSVEFSDH SQDSGDPSQQ NILQVKNVQA 300
  301 VLSIPEAESY KAQLLSSIAE EQKKKELQAK STVFL

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	1.22
Match:	2i1jA
Description:	No description for 2i1jA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits