| Protein: | iws1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 428 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for iws1.
| Description | E-value | Query Range |
Subject Range |
|
|
291.0 | [0..171] | [428..4] |
|
|
290.0 | [0..2] | [428..633] |
|
|
288.0 | [0..157] | [428..5] |
|
|
287.0 | [0..157] | [428..5] |
|
|
272.0 | [0..145] | [428..6] |
|
|
268.0 | [0..132] | [428..212] |
|
|
260.0 | [0..7] | [416..2] |
|
Region A: Residues: [1-142] |
1 11 21 31 41 51
| | | | | |
1 MSEEEKAELE NMQVESEAKT SENDQTIDTK VDVADVTTHV DEDLDNKEEA LDFSEDELSD 60
61 LDENQFENFD ESKIGREAEE PTIYNLPTFK KKQEPNTIEE NLEVPRKVRK EQKPRRRRGK 120
121 RSSTVDALND ELNELGENEE EV
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [143-239] |
1 11 21 31 41 51
| | | | | |
1 LTEQKQLDPT LAAKKELDLQ MDAVLKPTRT KKRSNEDNLE QMADDEVLRL REQMRLAALR 60
61 DAELNSEQLP ATEKLKMLPL VDAVLRKTHL YDTILDN
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [240-319] |
1 11 21 31 41 51
| | | | | |
1 NVLDSVRMWL EPLPDRSLPA LNIQRSLMDI LTKLPIQTEH LRESKIGRIV LFYTISKKPE 60
61 PFIKRIADNL VSEWSRPIIK
|
| Detection Method: | |
| Confidence: | 1.23 |
| Match: | 1eo0A |
| Description: | Transcription elongation factor TFIIS N-domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [320-428] |
1 11 21 31 41 51
| | | | | |
1 RSANYRDRAV GVASFNPEVF QTRRRRDLAA AESNDDAQAS RTGRTVIPRS IDSRYQVAPR 60
61 VRLNPTAMTI AGRMKPADTE QVRKLKAKMK AIRSKSSKKS GVSIEGRGL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.307 | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
| View | Download | 0.212 | d.49.1 | Signal recognition particle alu RNA binding heterodimer, SRP9/14 |
| View | Download | 0.218 | c.23.12 | Formate/glycerate dehydrogenase catalytic domain-like |
| View | Download | 0.205 | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.201 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
