| Protein: | SPCC23B6.01c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 489 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC23B6.01c.
| Description | E-value | Query Range |
Subject Range |
|
|
463.0 | [0..5] | [450..344] |
|
|
463.0 | [0..5] | [450..308] |
|
|
460.0 | [0..5] | [447..345] |
|
|
457.0 | [0..5] | [450..344] |
|
Region A: Residues: [1-489] |
1 11 21 31 41 51
| | | | | |
1 MRKWEIANEV CVDEKQDRDA EEIEDEGKNI ILGIVSQLRP NMDLSKVTFP TFVLEPKSML 60
61 ERITNFMSHP DLLLNVQKTA DPEMRFLDVV RFYMSGWHIR PRGVKKPLNP ILGETFTGFW 120
121 KFPPSNSKDP NLQKLHGIAV YAAEQVCHHP PISAYFYLCP EYKVRIDGVV KPRSRFLGNS 180
181 AASIMEGIAS IKLQDLDEEY LITQPNVYAR GILFGKMRLE LGDHVTVRCP KTDLQADIEF 240
241 KVKGFISGTY NSIAGKVKRV STGEVLYKIS GKWDSEMSVE SVKTGETRPL LDVSKHDVYL 300
301 VSARPLEEQG ERESQRLWYK TCQAVIARDQ TTATETKSAI EDRQREEAKQ REIENVQWKP 360
361 KYFKMIAPEE YILNFDIPNG KSDLEVLCAL DEFIPIFSEV DRIAFHKFLS ENTKPEDSSI 420
421 HKHSRDASGD STKGFAEHMP APARRRRPQS TASFVTYRSD NGSVDEYHDA QLPDPNTLSK 480
481 LHEEQDPAL
|
| Detection Method: |  |
| Confidence: | 98.045757 |
| Match: | 1zhtA |
| Description: | Structure of yeast oxysterol binding protein Osh4 in complex with 7-hydroxycholesterol |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| oxysterol binding | 5.22335714957681 | bayes_pls_golite062009 |
| sterol binding | 4.18891468109664 | bayes_pls_golite062009 |
| 3.02967613614595 | bayes_pls_golite062009 | |
| steroid binding | 2.54679035876403 | bayes_pls_golite062009 |
| binding | 2.33916303349911 | bayes_pls_golite062009 |
| phosphoinositide binding | 2.2725849852584 | bayes_pls_golite062009 |
| phospholipid binding | 2.08170907241909 | bayes_pls_golite062009 |
| cholesterol binding | 1.74311885098566 | bayes_pls_golite062009 |
| phosphatidylinositol-4,5-bisphosphate binding | 1.72950454023501 | bayes_pls_golite062009 |
| lipid binding | 1.52883493550389 | bayes_pls_golite062009 |
