YRC Public Data Repository - Protein Structure Prediction

Protein:	SPBP4H10.17c
Organism:	Schizosaccharomyces pombe
Length:	341 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBP4H10.17c.

Description	E-value	Query Range	Subject Range
gi\|78066438, gi\|... - gi\|78066438\|ref\|YP_369207.1\| Alpha/beta hydrolase [Burkholderia sp. 383], gi\|77967183\|gb\|ABB08563.1\|...	169.0	[0..44]	[323..1]
gi\|68529012, gi\|... - gi\|94314231\|ref\|YP_587440.1\| alpha/beta hydrolase fold [Ralstonia metallidurans CH34], gi\|93358083\|g...	164.0	[0..44]	[323..1]
gi\|83633852, gi\|... - gi\|83645809\|ref\|YP_434244.1\| alpha/beta superfamily hydrolase/acyltransferase [Hahella chejuensis KC...	163.0	[0..6]	[324..9]
gi\|148253777, gi... - gi\|78693761\|ref\|ZP_00858275.1\| non-heme chloroperoxidase (chloride peroxidase) (CPO-F) (chloroperoxi...	163.0	[0..5]	[323..8]
gi\|113731539, gi... - gi\|167644271\|ref\|YP_001681934.1\| alpha/beta hydrolase fold [Caulobacter sp. K31], gi\|167346701\|gb\|AB...	163.0	[0..46]	[323..70]
tr\|Q889S4\|Q889S4... - Arylesterase OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=PSPTO_0675 PE=4 SV=1 gi\|28867903, gi\|... - gi\|28867903\|ref\|NP_790522.1\| arylesterase [Pseudomonas syringae pv. tomato str. DC3000], gi\|28851139...	162.0	[0..44]	[323..1]
gi\|169762996 - gi\|169762996\|ref\|XP_001727398.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|83770426 - gi\|83770426\|dbj\|BAE60559.1\| unnamed protein product [Aspergillus oryzae]	162.0	[0..54]	[323..7]
gi\|91690961, gi\|... - gi\|91778301\|ref\|YP_553509.1\| non-heme chloroperoxidase [Burkholderia xenovorans LB400], gi\|91690961\|...	161.0	[0..44]	[322..1]
gi\|19914821, gi\|... - gi\|20089870\|ref\|NP_615945.1\| chloride peroxidase [Methanosarcina acetivorans C2A], gi\|19914821\|gb\|AA...	161.0	[0..47]	[323..4]
gi\|73539032, gi\|... - gi\|73539032\|ref\|YP_299399.1\| Alpha/beta hydrolase fold [Ralstonia eutropha JMP134], gi\|72122369\|gb\|A...	161.0	[0..44]	[324..1]

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Predicted Domain #1

Region A:
Residues: [1-341]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFRKEELSQ TLYENESEQS SETKELMLNN EESLSDWRNY FDEKLTIPGE SGALNGTING  60
   61 YLTLPQPDGC LLVLQHGAGS SAMSFAPVTQ ELLSNSDNKV GFLALDLRAH GETTLEPESD 120
  121 MSLETLSKDF THAVSYVQRM FELDEKIILV GHSLGGAICA YCAFQKTIPN TSGLVVIDVV 180
  181 EGTAMEALGF MKTYLSNRPT SFKSIDDAIS WHIKTLVTRN RLSACITVPS LLVQQEDGTF 240
  241 VWRTDLYKTS PYWMDWFKGL SDKFLRAPYG RMLIVAGTDR LDKTLTIGQM QGKYQLEILP 300
  301 ETGHFVHEDV PAKISSLLLN FWHRNQPLVL PPKVGATPVL Q

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	33.045757
Match:	1s8oA
Description:	Human soluble Epoxide Hydrolase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
catalytic activity	1.39629727416851	bayes_pls_golite062009
hydrolase activity, acting on ester bonds	1.36321860321357	bayes_pls_golite062009
hydrolase activity	1.1444670166202	bayes_pls_golite062009
binding	0.386006007682309	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: