YRC Public Data Repository - Protein Structure Prediction

Protein:	fis1
Organism:	Schizosaccharomyces pombe
Length:	160 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fis1.

Description	E-value	Query Range	Subject Range
gi\|38106670, gi\|... - gi\|39975997\|ref\|XP_369389.1\| conserved hypothetical protein [Magnaporthe grisea 70-15], gb\|EAA52947.... gi\|59802875 - gi\|59802875\|gb\|AAX07651.1\| hypothetical protein [Magnaporthe grisea]	148.0	[0..8]	[158..2]
gi\|114615095 - gi\|114615095\|ref\|XP_001143081.1\| PREDICTED: similar to Fission 1 (mitochondrial outer membrane) homo...	147.0	[0..7]	[150..241]
FIS1_NEUCR - Mitochondria fission 1 protein OS=Neurospora crassa GN=fis-1 PE=3 SV=1 FIS1_NEUCR - Mitochondria fission 1 protein OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / D...	146.0	[0..9]	[158..2]
FIS1_EMENI - Mitochondria fission 1 protein OS=Emericella nidulans GN=fis1 PE=3 SV=1 FIS1_EMENI - Mitochondria fission 1 protein OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NR...	144.0	[0..11]	[156..6]
FIS1_TUBBO - Mitochondria fission 1 protein OS=Tuber borchii GN=FIS1 PE=2 SV=1	143.0	[0..11]	[159..6]
gi\|115384252, gi... - gi\|115384252\|ref\|XP_001208673.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	142.0	[0..15]	[147..6]
gi\|119190031, gi... - gi\|90304408\|gb\|EAS34039.1\| hypothetical protein CIMG_05063 [Coccidioides immitis RS], gi\|119190031\|r... gi\|240110997 - gi\|240110997\|gb\|EER29150.1\| Tetratricopeptide repeat containing protein [Coccidioides posadasii C735...	137.0	[0..8]	[157..2]
gi\|159129723 - gi\|159129723\|gb\|EDP54837.1\| mitochondrial membrane fission protein (Fis1), putative [Aspergillus fum... FIS1_ASPFU - Mitochondria fission 1 protein OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / ... FIS1_ASPFU - Mitochondria fission 1 protein OS=Aspergillus fumigatus GN=fis1 PE=3 SV=1	133.0	[0..16]	[158..9]
gi\|49646438 - gi\|49646438\|emb\|CAG82803.1\| YALI0B06556p [Yarrowia lipolytica] gi\|49646438, gi\|... - gi\|50546090\|ref\|XP_500572.1\| YALI0B06556p [Yarrowia lipolytica], gi\|49646438\|emb\|CAG82803.1\| unnamed...	132.0	[0..14]	[159..20]
FIS1A_ARATH - Mitochondrial fission 1 protein A OS=Arabidopsis thaliana GN=FIS1A PE=1 SV=1	129.0	[0..25]	[158..35]

Back

Predicted Domain #1

Region A:
Residues: [1-160]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEKHTLRLA DPSAIDSIIS VDEFLQIKEQ YDAEQPLITL QTKFNLAWAL VRSDSTQHVQ  60
   61 QGLSLFCSIY KDSPERRLEC LYYIALSHYK LKQYEESRRY LNMLLSKDPN SPEALKLKNR 120
  121 LYDAVTKEGY IGMVVVAGAV VSVAALVGWA SKRLFSKRRP

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	28.154902
Match:	1pc2A
Description:	Solution structure of human mitochondria fission protein Fis1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
binding	2.14253214573541	bayes_pls_golite062009
protein binding	1.65083457326273	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: