| Protein: | SPBC543.05c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 517 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC543.05c.
| Description | E-value | Query Range |
Subject Range |
|
|
692.0 | [0..3] | [516..665] |
|
|
683.0 | [0..3] | [516..661] |
|
|
681.0 | [0..4] | [507..444] |
|
|
679.0 | [0..4] | [507..444] |
|
|
678.0 | [0..4] | [507..444] |
|
|
668.0 | [0..4] | [507..745] |
|
|
662.0 | [0..3] | [516..674] |
|
|
662.0 | [0..4] | [507..530] |
|
Region A: Residues: [1-89] |
1 11 21 31 41 51
| | | | | |
1 MNKKDKKFNY IFGSEIVNDV KKRLPYYKSD WIDACHYRVL PACLNIYFSN LLPELAFALD 60
61 MFAKTNNSFG VNEVLLASVL GSVVFALLS
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.733 | N/A | N/A | a.144.1 | PABC (PABP) domain |
| View | Download | 0.553 | N/A | N/A | a.21.1 | HMG-box |
| View | Download | 0.516 | N/A | N/A | a.60.11 | Hypothetical protein YjbJ |
| View | Download | 0.511 | N/A | N/A | a.21.1 | HMG-box |
| View | Download | 0.495 | N/A | N/A | a.37.1 | A DNA-binding domain in eukaryotic transcription factors |
|
Region A: Residues: [90-213] |
1 11 21 31 41 51
| | | | | |
1 SQPLCIVGVT GPITVFNYTV YDIMHDRGTP YFPFLCWICL WSMIFHFIIA IANGVYFVKH 60
61 ITKFSCEIFG LYVAFIYLEK GVQVLCDQLK YGLTNTFLSI TIALLFLMVG WLCDTVGKSS 120
121 LFSY
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [214-293] |
1 11 21 31 41 51
| | | | | |
1 KVRILLLDYG LVASIIFFSG FQHIGKMREV SLAKLPTTKA FEPTLSRSWF IKFWKIPVGD 60
61 VFLAIPFSIV LTILFYFDHN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [294-363] |
1 11 21 31 41 51
| | | | | |
1 VSSVMAQDPS FPLTKPAGFH WDFFLLGITT GVSGILGIPA PNGLIPQAPM HTAALCVKRV 60
61 DYDEDEIEKT
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [364-517] |
1 11 21 31 41 51
| | | | | |
1 HKEVIDRVVE QRASNFIQGL MTVGTMTGPL LLVLHQIPQC VLAGLFWVMG FSAIFGNGIT 60
61 QNVIWMLSDR KVVSKNHTLN HCSSKRVVWL YTILQLIGFG ATFAITQVDK ASIGFPIIIL 120
121 LLIPFRTYCM PKWFLEEDLE ILDENVGIIA YQKV
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
