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View Structure Prediction Details

Protein: SPBC409.18
Organism: Schizosaccharomyces pombe
Length: 279 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC409.18.

Description E-value Query
Range
Subject
Range
gi|27542785 - gi|27542785|gb|AAO16875.1| PAP2A-GFP fusion protein [synthetic construct]
224.0 [0..14] [278..10]
PLPP1_CAVPO - Phospholipid phosphatase 1 OS=Cavia porcellus GN=PLPP1 PE=2 SV=1
215.0 [0..14] [277..10]
gi|122692411, gi... - gi|81674095|gb|AAI09902.1| Phosphatidic acid phosphatase type 2A [Bos taurus], gi|122692411|ref|NP_0...
212.0 [0..14] [277..10]
gi|49075656, gi|... - gi|71020361|ref|XP_760411.1| hypothetical protein UM04264.1 [Ustilago maydis 521], ref|XP_401879.1| ...
210.0 [0..3] [266..41]
PPAP2A - phosphatidic acid phosphatase type 2A
207.0 [0..14] [277..10]
gi|114600248 - gi|114600248|ref|XP_517759.2| PREDICTED: phosphatidic acid phosphatase type 2A isoform 3 [Pan troglo...
206.0 [0..14] [277..10]
gi|73956402 - gi|73956402|ref|XP_536696.2| PREDICTED: similar to phosphatidic acid phosphatase type 2B [Canis fami...
206.0 [0..9] [279..32]

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Predicted Domain #1
Region A:
Residues: [1-83]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEAVGKHVKL FWNVYSDYAV LIAISLSYFV FDVLMLPFTR QFSLEDITIS HPFALHEQVP  60
   61 TKYLGIICVF FPALVLYGFG KLR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [84-279]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NNSLLFWKSL MGLLYSTMVC GLCVSLLKNA VGRPRPDFLA RCQPFESTPK TGLVDVLSCS  60
   61 VPWSDKVLQD GFRSFPSGHT SFSFAGLGFL AIFLAGQLKM FRNKTSSWKV VVPLVPLSIA 120
  121 SWIGLSRSQD YRHHKEDIAV GALFGFAIAY VVYRQLFPPL DHHNADILYV QAELDEGYTN 180
  181 VHSAGNSSAT NAEQMV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 11.0
Match: 1d2tA
Description: Bacterial acid phosphatase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle