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View Structure Prediction Details

Protein: SPCC1183.02
Organism: Schizosaccharomyces pombe
Length: 220 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC1183.02.

Description E-value Query
Range
Subject
Range
gi|215767624, gi... - gi|54290815|dbj|BAD61454.1| putative glutathione transferase F4 [Oryza sativa Japonica Group], gi|54...
173.0 [0..1] [214..16]
gi|4468794, gi|1... - gi|4468794|emb|CAB38119.1| Glutathione transferase III(b) [Zea mays], pir||T52083 glutathione transf...
172.0 [0..1] [209..1]
gi|17385642 - gi|17385642|dbj|BAB32446.2| glutathione S-transferase [Matricaria chamomilla]
172.0 [0..4] [210..6]
gi|18150415 - gi|18150415|gb|AAL61612.1|AF401623_1 glutathione S-transferase [Allium cepa]
170.0 [0..4] [206..3]
gi|2052029, gi|7... - pir||T07156 probable glutathione transferase (EC 2.5.1.18) - soybean, gi|2052029|emb|CAA71784.1| glu...
170.0 [0..1] [210..1]

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Predicted Domain #1
Region A:
Residues: [1-220]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLGTLYSFK TNTRTVCLLE LAKLLDLQVD LVETYPHKFS ADLAAKFPLQ KLPVFIGADG  60
   61 FELSEVIAIV KYFYEKGKHN DKEGLGPVNE VEEAEMLKWM CFINFDIVTP QNVRPWVGMF 120
  121 RGNIPYEEKP FKESATRAID SLKIPNELVK DRTYLVGDRF TLADLFFGSL LRIFFNSIID 180
  181 EKTRKELPHL TRYYITMFHQ AKLETYFPLE LPLTVTVAKK 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.69897
Match: 1aw9A
Description: STRUCTURE OF GLUTATHIONE S-TRANSFERASE III IN APO FORM
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.672192331361968 bayes_pls_golite062009
nucleic acid binding 0.17259853770512 bayes_pls_golite062009
binding 0.0252996628567801 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle