YRC Public Data Repository - Protein Structure Prediction

Protein:	SPBC1271.14
Organism:	Schizosaccharomyces pombe
Length:	445 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC1271.14.

Description	E-value	Query Range	Subject Range
gi\|85102751 - gi\|85102751\|ref\|XP_961381.1\| hypothetical protein [Neurospora crassa OR74A] gi\|28922926, gi\|... - gi\|32412616\|ref\|XP_326788.1\| hypothetical protein [Neurospora crassa], gi\|28922926\|gb\|EAA32145.1\| hy...	577.0	[0..22]	[445..41]
ARGJ_BACCZ - Arginine biosynthesis bifunctional protein ArgJ OS=Bacillus cereus (strain ZK / E33L) GN=argJ PE=3 S...	564.0	[0..21]	[445..5]
ARGJ_GEOKA - Arginine biosynthesis bifunctional protein ArgJ OS=Geobacillus kaustophilus GN=argJ PE=3 SV=1 ARGJ_GEOKA - Arginine biosynthesis bifunctional protein ArgJ OS=Geobacillus kaustophilus (strain HTA426) GN=argJ ...	562.0	[0..29]	[445..15]
gi\|228811839, gi... - gi\|228947852\|ref\|ZP_04110139.1\| Arginine biosynthesis bifunctional protein argJ beta chain [Bacillus... gi\|65321523 - gi\|65321523\|ref\|ZP_00394482.1\| COG1364: N-acetylglutamate synthase (N-acetylornithine aminotransfera... gi\|49187037, gi\|... - gi\|49187037\|ref\|YP_030289.1\| bifunctional ornithine acetyltransferase/N-acetylglutamate synthase pro...	561.0	[0..21]	[445..5]
ARGJ_BACAN - Arginine biosynthesis bifunctional protein ArgJ OS=Bacillus anthracis GN=argJ PE=3 SV=1 gi\|21402186 - ref\|NP_658171.1\| ArgJ, ArgJ family [Bacillus anthracis str. A2012] gi\|218905271, gi... - gi\|218905271\|ref\|YP_002453105.1\| glutamate N-acetyltransferase/amino-acid acetyltransferase [Bacillu... gi\|190565859, gi... - gi\|190565859\|ref\|ZP_03018778.1\| glutamate N-acetyltransferase/amino-acid acetyltransferase [Bacillus... gi\|177652706, gi... - gi\|177652706\|ref\|ZP_02935122.1\| glutamate N-acetyltransferase/amino-acid acetyltransferase [Bacillus... gi\|47504798, gi\|... - gi\|47529650\|ref\|YP_020999.1\| bifunctional ornithine acetyltransferase/N-acetylglutamate synthase pro... gi\|227006718, gi... - gi\|227816910\|ref\|YP_002816919.1\| glutamate N-acetyltransferase/amino-acid acetyltransferase [Bacillu... gi\|30264209, gi\|... - gi\|30264209\|ref\|NP_846586.1\| bifunctional ornithine acetyltransferase/N-acetylglutamate synthase pro... gi\|254683898 - gi\|254683898\|ref\|ZP_05147758.1\| bifunctional ornithine acetyltransferase/N-acetylglutamate synthase ... gi\|229602352, gi... - gi\|229602352\|ref\|YP_002868432.1\| glutamate N-acetyltransferase/amino-acid acetyltransferase [Bacillu... gi\|254736245 - gi\|254736245\|ref\|ZP_05193951.1\| bifunctional ornithine acetyltransferase/N-acetylglutamate synthase ... gi\|254721733 - gi\|254721733\|ref\|ZP_05183522.1\| bifunctional ornithine acetyltransferase/N-acetylglutamate synthase ... gi\|254758224 - gi\|254758224\|ref\|ZP_05210251.1\| bifunctional ornithine acetyltransferase/N-acetylglutamate synthase ... gi\|170129182, gi... - gi\|170705642\|ref\|ZP_02896105.1\| glutamate N-acetyltransferase/amino-acid acetyltransferase [Bacillus... gi\|254754084 - gi\|254754084\|ref\|ZP_05206119.1\| bifunctional ornithine acetyltransferase/N-acetylglutamate synthase ... gi\|170668752, gi... - gi\|170687135\|ref\|ZP_02878353.1\| glutamate N-acetyltransferase/amino-acid acetyltransferase [Bacillus... gi\|167512548, gi... - gi\|167639489\|ref\|ZP_02397760.1\| glutamate N-acetyltransferase/amino-acid acetyltransferase [Bacillus... gi\|164713064, gi... - gi\|165871145\|ref\|ZP_02215795.1\| glutamate N-acetyltransferase/amino-acid acetyltransferase [Bacillus...	561.0	[0..21]	[445..4]
ARGJ_BACHK - Arginine biosynthesis bifunctional protein ArgJ OS=Bacillus thuringiensis subsp. konkukian (strain 9... ARGJ_BACHK - Arginine biosynthesis bifunctional protein ArgJ OS=Bacillus thuringiensis subsp. konkukian GN=argJ P...	560.0	[0..21]	[445..5]
ARGJ_BACCR - Arginine biosynthesis bifunctional protein ArgJ OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM... gi\|229129412, gi... - gi\|229129412\|ref\|ZP_04258383.1\| Arginine biosynthesis bifunctional protein argJ beta chain [Bacillus...	560.0	[0..21]	[445..5]
ARGJ_BACC1 - Arginine biosynthesis bifunctional protein ArgJ OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=...	559.0	[0..21]	[445..4]
ARGJ_OCEIH - Arginine biosynthesis bifunctional protein ArgJ OS=Oceanobacillus iheyensis (strain DSM 14371 / JCM ... ARGJ_OCEIH - Arginine biosynthesis bifunctional protein argJ OS=Oceanobacillus iheyensis GN=argJ PE=3 SV=1	559.0	[0..20]	[445..5]
gi\|47568193, gi\|... - gi\|47568193\|ref\|ZP_00238897.1\| arginine biosynthesis bifunctional protein ArgJ [Bacillus cereus G924...	558.0	[0..21]	[445..4]

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Predicted Domain #1

Region A:
Residues: [1-445]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTKIFARLA GIGRARFVGT MPDKTKFISK SGTYPQGFSL NGIASGVKAN GKKDLAILFS  60
   61 SRPCNAAAVF TKNAFQAAPV QVSRQTLNGC GGKDIHCVVF NSGCANAVTG EGGLMDAQLI 120
  121 TAEADNLTRP HWTSWTENSE EFPSSLVMST GVIGQRLKLD KIQSGLEHAV EDLGSTHEYW 180
  181 MRAAEAICTT DTFPKLVSRE LSIAGKVYRI AGFAKGAGMI NPNLATLLGL FVTDAPISVD 240
  241 AVRSILRHAI NNSFNSISID GDTSTNDTIA FLANGAAGGS EITKSSPAYK EIRDAVTDIA 300
  301 QQLAKLVVRD GEGATKFVTV QVRGARSEKD AALVASTISN SALVKTAFFG EDANWGRILC 360
  361 AVGYSGAAVN PPATTVSFIP ADGTEPLKLL VNGEPQNVDE TRASEILSQD ELTVDVDLGC 420
  421 GPYAKTNWTC DFSYDYVRIN ADYRS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	120.0
Match:	1vz6A
Description:	Ornithine Acetyltransferase (ORF6 Gene Product - Clavulanic Acid Biosynthesis) from Streptomyces clavuligerus
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
glutamate N-acetyltransferase activity	7.31583566409397	bayes_pls_golite062009
acetyl-CoA:L-glutamate N-acetyltransferase activity	5.4926416554153	bayes_pls_golite062009
N-acetyltransferase activity	4.96696522207886	bayes_pls_golite062009
N-acyltransferase activity	4.73607169922009	bayes_pls_golite062009
transferase activity, transferring acyl groups	3.68873019774933	bayes_pls_golite062009
acetyltransferase activity	2.5583016526898	bayes_pls_golite062009
catalytic activity	1.79436687732784	bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups	1.59037053975861	bayes_pls_golite062009
acyltransferase activity	1.58751303684177	bayes_pls_golite062009
transferase activity	1.00050620701588	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: