| Protein: | cft2 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 797 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cft2.
| Description | E-value | Query Range |
Subject Range |
|
|
511.0 | [0..1] | [797..4] |
|
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511.0 | [0..1] | [797..4] |
|
|
510.0 | [0..1] | [797..4] |
|
|
510.0 | [0..1] | [797..4] |
|
|
509.0 | [0..1] | [797..4] |
|
|
508.0 | [0..1] | [797..4] |
|
|
500.0 | [0..1] | [797..4] |
|
Region A: Residues: [1-716] |
1 11 21 31 41 51
| | | | | |
1 MLNYQCLETD SYCGTSHIEL DGIHIYIDPG SDDSLKHPEV PEQPDLILLS HSDLAHIGGL 60
61 VYAYYKYDWK NAYIYATLPT INMGRMTMLD AIKSNYISDM SKADVDAVFD SIIPLRYQQP 120
121 TLLLGKCSGL TITAYNAGHT LGGTLWSLIK ESESVLYAVD WNHSKDKHLN GAALYSNGHI 180
181 LEALNRPNTL ITDANNSLVS IPSRKKRDEA FIESVMSSLL KGGTVLLPVD AASRVLELCC 240
241 ILDNHWSASQ PPLPFPILFL SPTSTKTIDY AKSMIEWMGD NIVRDFGINE NLLEFRNINT 300
301 ITDFSQISHI GPGPKVILAT ALTLECGFSQ RILLDLMSEN SNDLILFTQR SRCPQNSLAN 360
361 QFIRYWERAS KKKRDIPHPV GLYAEQAVKI KTKEPLEGEE LRSYQELEFS KRNKDAEDTA 420
421 LEFRNRTILD EDLSSSSSSE DDDLDLNTEV PHVALGSSAF LMGKSFDLNL RDPAVQALHT 480
481 KYKMFPYIEK RRRIDEYGEI IKHQDFSMIN EPANTLELEN DSDDNALSNS NGKRKWSEIN 540
541 DGLQQKKEEE DEDEVPSKII TDEKTIRVSC QVQFIDIEGL HDGRSLKTII PQVNPRRLVL 600
601 IHASTEEKED MKKTCASLSA FTKDVYIPNY GEIINVSIDV NAFSLKLADD LIKNLIWTKV 660
661 GNCEVSHMLA KVEISKPSEE EDKKEEVEKK DGDKERNEEK KEEKETLPVL NALTLR
|
| Detection Method: |  |
| Confidence: | 54.0 |
| Match: | 2i7xA |
| Description: | No description for 2i7xA was found. |
| Term | Confidence | Notes |
| RNA binding | 1.48455378212673 | bayes_pls_golite062009 |
| nucleic acid binding | 0.980281910076056 | bayes_pls_golite062009 |
| catalytic activity | 0.941400907161877 | bayes_pls_golite062009 |
| binding | 0.862029507899862 | bayes_pls_golite062009 |
|
Region A: Residues: [717-797] |
1 11 21 31 41 51
| | | | | |
1 SDLARAPRAA PLLVGNIRLA YLRKALLDQG ISAELKGEGV LLCGGAVAVR KLSGGKISVE 60
61 GSLSNRFFEI RKLVYDALAV V
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.582 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.577 | a.77.1 | DEATH domain |
| View | Download | 0.701 | d.105.1 | Clathrin adaptor appendage, alpha and beta chain-specific domain |
| View | Download | 0.608 | d.105.1 | Clathrin adaptor appendage, alpha and beta chain-specific domain |
| View | Download | 0.581 | d.58.23 | Probable ACP-binding domain of malonyl-CoA ACP transacylase |
