| Protein: | SPBC18H10.16 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 1050 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC18H10.16.
| Description | E-value | Query Range |
Subject Range |
|
|
651.0 | [0..34] | [912..235] |
|
|
645.0 | [0..38] | [912..241] |
|
|
641.0 | [0..38] | [912..247] |
|
|
640.0 | [0..38] | [912..299] |
|
|
638.0 | [0..38] | [912..246] |
|
|
638.0 | [0..38] | [912..248] |
|
|
624.0 | [0..38] | [912..240] |
|
|
622.0 | [0..38] | [912..220] |
|
Region A: Residues: [1-521] |
1 11 21 31 41 51
| | | | | |
1 MARLLTKSSQ VFDFLADRLS VRKSRRFWET QENLESSTPL LQEPQQSYRS NSFNELPPLS 60
61 RSVTFAENEQ PNEAVKLGTF EGCFIPTTLN VLSILLYLRF PWIIGEAGVL KTLLMLFISY 120
121 AVGIFTSLSI SAICTNGMVR GGGAYYAVSR SIGPELGGSI GLIFYVGQIL NTGMNISGFV 180
181 EPIISIFGKE SGTISQFLPE GYWWVFLYTT CVLAMCCILC CLGSAIFAKA SNALFVVIIL 240
241 STISIPISSI FVHPFKDPSL LVHFTGLKWS TLMKNLASAY TENEKGTGYE SFKSTFGVFF 300
301 PATAGLLAGA SMSGDLKAPS RSIPKGTISS QATTFLLYLL VILCVGASVT RTGLLLDMDV 360
361 MEHISLHPLF IISGILSSGA FSSFMGIFGA AKLLQAIARD DLIPGMFFFA KGSSYDDIPY 420
421 VAIGVTYLIT QISLFWDINM LSSMITMTFL LTFGFINLSC FLLRISSTPN FRPTFRYFNR 480
481 RTTLVGTILS FGVMFYVDRL NAFISFLIAG ILVVVIYFTC P
|
| Detection Method: |  |
| Confidence: | 9.39794 |
| Match: | 1fftA |
| Description: | Cytochrome O ubiquinol oxidase, subunit I |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [522-714] |
1 11 21 31 41 51
| | | | | |
1 PKNWGDVSQG IIYHQLRKYL LQTNKARENI KFWRPQILLL INNPNRSENV IRFCNSLKKG 60
61 SLYILGHVIV SDDFQASMDD LRKQQRLWHQ FVLDRGIKAF VELTIAPDEV WGIRGLISSA 120
121 GLGGIRPNIA VLTFINTNYR RHRIYSGSSF SLENTSEESE SDSKKEFVEH DILPVKWVQI 180
181 LEDMLVGSVD VMV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [715-921] |
1 11 21 31 41 51
| | | | | |
1 TNGFDRLNWP KRKGEKQYID MFPIHRISGV GSEVNESTPT FATNFETYTM VFQLSWILHT 60
61 ASDWKQGCRL RLITLVEFEN EIEAERESMH QMLETFRIKA DVVVLCLAAM NLDAYRYIVK 120
121 NEHVRPSKSS ELENLLKDDS WWQEEKKRRG NTVDSLGPIR FPRRMSGYNF RSASFDKSAP 180
181 PLSVPLSFRL GPHMHSVKSF ETESSFG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [922-1050] |
1 11 21 31 41 51
| | | | | |
1 NRSLSPKQEN RRTYSDSTIE SSLMPNVVRE DSSSDRLAPK KKIGRDYSKE KLTFNDLSSR 60
61 SQYIIMNEIV LKHTKNTSVL FTVLPAPLAD THKSFRKSEE YVDDLLIFME GLPPCALIHS 120
121 KSLTITTAL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
