YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC328.07c
Organism:	Schizosaccharomyces pombe
Length:	277 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC328.07c.

Description	E-value	Query Range	Subject Range
gi\|49096690, gi\|... - gi\|67538996\|ref\|XP_663272.1\| hypothetical protein AN5668.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	308.0	[0..18]	[273..107]
gi\|28917110, gi\|... - gi\|32407876\|ref\|XP_324434.1\| hypothetical protein [Neurospora crassa], gi\|28917110\|gb\|EAA26830.1\| co... gi\|85077833 - gi\|85077833\|ref\|XP_956066.1\| hypothetical protein NCU05077 [Neurospora crassa OR74A]	308.0	[0..10]	[273..44]
gi\|42555224, gi\|... - gi\|46126991\|ref\|XP_388049.1\| hypothetical protein FG07873.1 [Gibberella zeae PH-1], gi\|42555224\|gb\|E...	282.0	[0..10]	[273..39]
gi\|39942794, gi\|... - gi\|39942794\|ref\|XP_360934.1\| hypothetical protein MG03477.4 [Magnaporthe grisea 70-15], gb\|EAA51882....	279.0	[0..4]	[272..27]
gi\|115389854, gi... - gi\|115389854\|ref\|XP_001212432.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	276.0	[0..10]	[273..51]
gi\|70993220, gi\|... - gi\|70993220\|ref\|XP_751457.1\| metal homeostatis protein bsd2 [Aspergillus fumigatus Af293], gi\|668490... gi\|159125608 - gi\|159125608\|gb\|EDP50725.1\| metal homeostatis protein bsd2 [Aspergillus fumigatus A1163]	273.0	[0..21]	[273..143]
gi\|169764443 - gi\|169764443\|ref\|XP_001816693.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|83764547 - gi\|83764547\|dbj\|BAE54691.1\| unnamed protein product [Aspergillus oryzae]	273.0	[0..4]	[273..31]
gi\|44985803 - gi\|44985803\|gb\|AAS54427.1\| AGL063Cp [Ashbya gossypii ATCC 10895] gi\|44985803, gi\|... - gi\|45201033\|ref\|NP_986603.1\| AGL063Cp [Ashbya gossypii ATCC 10895], gi\|44985803\|gb\|AAS54427.1\| AGL06...	271.0	[0..33]	[271..8]
gi\|151946675 - gi\|151946675\|gb\|EDN64897.1\| conserved protein [Saccharomyces cerevisiae YJM789] gi\|207347443 - gi\|207347443\|gb\|EDZ73609.1\| YBR290Wp-like protein [Saccharomyces cerevisiae AWRI1631] BSD2 - Heavy metal ion homeostasis protein, facilitates trafficking of Smf1p and Smf2p metal transporters t... BSD2_YEAST - Metal homeostatis protein BSD2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BSD2 PE=1...	270.0	[0..33]	[264..46]
gi\|46445102, gi\|... - gi\|68465447\|ref\|XP_723085.1\| potential metal homeostasis protein [Candida albicans SC5314], gi\|46445...	268.0	[0..4]	[267..21]

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Predicted Domain #1

Region A:
Residues: [1-155]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTNSNQNSI HTPIPEFPEN RSTNRSELAA AFEPPDDDVE YSETAPLYSS ARASIEGEEA  60
   61 FYQHLSTPDP GNDSGHVRSS NDRIPSTSSN HADGHHVDSV FSNLSAKPTV ESNTEELEEE 120
  121 PPSYEQAAAD TAPPYWDTTM VIPDYGSNEI YIDGM

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [156-277]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SVGTGFSFVW SACVAILFPF VGFLVTYVLS TTHLGRYGAQ IGLSLTLFQR GYIMISESGM  60
   61 ENNDDQYNYD ELPHQKLIGS ILIIIGWCLV LVDTFGFIRI RRMKNAISRT DSPGETSPEE 120
  121 VV

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits