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View Structure Prediction Details

Protein: SPBP19A11.02c
Organism: Schizosaccharomyces pombe
Length: 244 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBP19A11.02c.

Description E-value Query
Range
Subject
Range
gi|157767772 - gi|157767772|ref|XP_001667366.1| Hypothetical protein CBG01854 [Caenorhabditis briggsae AF16]
gi|187037627, gi... - gi|39590900|emb|CAE58680.1| Hypothetical protein CBG01854 [Caenorhabditis briggsae], gi|187037627|em...
123.0 [0..4] [244..975]
gi|33310026 - gi|33310026|gb|AAQ03243.1|AF414112_1 putative cell wall protein FLO11p [Candida albicans]
gi|68482880, gi|... - gi|68482880|ref|XP_714666.1| putative cell wall adhesin [Candida albicans SC5314], gi|46436253|gb|EA...
116.0 [0..4] [240..212]
gi|70876557 - gi|70876557|gb|EAN89996.1| hypothetical protein, conserved [Trypanosoma cruzi]
gi|71421620 - gi|71421620|ref|XP_811847.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
115.0 [0..2] [237..242]
gi|12642614 - gi|12642614|gb|AAK00311.1|AF315821_1 DNA-dependent RNA polymerase II largest subunit RPB1 [Monosiga ...
114.0 [0..11] [239..1506]
gi|76163234, gi|... - gi|76261874|ref|ZP_00769457.1| Putative Ig [Chloroflexus aurantiacus J-10-fl], gi|76163234|gb|EAO574...
112.0 [0..9] [227..1]
gi|73955449 - gi|73955449|ref|XP_858007.1| PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide A ...
108.0 [0..101] [241..1707]
TCNA_TRYCR - Sialidase OS=Trypanosoma cruzi GN=TCNA PE=2 SV=1
108.0 [0..4] [240..811]

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Predicted Domain #1
Region A:
Residues: [1-95]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQFSVLCKFL LLVTAVMAQT EYTPGFTTDV ATTVTPTPLP SANVTTTSFS SASTETSTHS  60
   61 VTSTNITSIV PPPSTSHNST TTTVPPTTSM NTTTT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [96-244]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VPPTTSLNTT TTTAPPTTHV NSTTTVVPPT THVNTTTVVP PTTHVNTTTV VPPTTHANTT  60
   61 SFVPTTTESS IHPITTGFYN TTFTTGYFNT SVTSVAVHNS TTVFPTSVPI VNTTSFNVTT 120
  121 IPSSAVHYAS PSGLLALVVM LISAFAFLA

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.17
Match: 2j63A
Description: No description for 2j63A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle