Protein: | sec65 |
Organism: | Schizosaccharomyces pombe |
Length: | 199 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sec65.
Description | E-value | Query Range |
Subject Range |
|
241.0 | [0..5] | [178..61] |
|
208.0 | [0..5] | [167..79] |
|
200.0 | [0..5] | [182..59] |
|
200.0 | [0..5] | [158..100] |
|
200.0 | [0..5] | [150..75] |
|
199.0 | [0..5] | [148..125] |
|
197.0 | [0..5] | [184..59] |
|
192.0 | [0..5] | [142..92] |
|
191.0 | [0..5] | [143..93] |
Region A: Residues: [1-100] |
1 11 21 31 41 51 | | | | | | 1 MPSIILYPIY FDKSRPRRFR CVPKDKAILN PLAKNIADVV RDLGYKCKLE PLKTHPADWV 60 61 NPGRVEMVLP EKIQKKYVIN EIAKVLLLRP TVKTDPLSLP |
Detection Method: | |
Confidence: | 28.154902 |
Match: | 1mfqB |
Description: | SRP19 |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [101-199] |
1 11 21 31 41 51 | | | | | | 1 IQNVPARLPE NPPAYPKGVL GNTILPLHSP ALSGGGISEN MFQEMMQEMQ KQPGLAGGMN 60 61 PMAALAGMGG PAPPMPTPQA SSSQRKQKSI EPEYDLDLE |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.663 | a.23.4 | Mitochondrial import receptor subunit Tom20 |
View | Download | 0.663 | a.23.4 | Mitochondrial import receptor subunit Tom20 |
View | Download | 0.328 | a.77.1 | DEATH domain |
View | Download | 0.317 | a.118.9 | ENTH/VHS domain |
View | Download | 0.317 | a.118.9 | ENTH/VHS domain |
View | Download | 0.311 | a.190.1 | Description not found. |
View | Download | 0.287 | a.118.8 | TPR-like |
View | Download | 0.286 | a.77.1 | DEATH domain |
View | Download | 0.246 | c.84.1 | Phosphoglucomutase, first 3 domains |
View | Download | 0.236 | a.39.1 | EF-hand |