| Protein: | cip1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 490 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cip1.
| Description | E-value | Query Range |
Subject Range |
|
|
233.0 | [0..44] | [486..49] |
|
|
233.0 | [0..44] | [481..49] |
|
Region A: Residues: [1-287] |
1 11 21 31 41 51
| | | | | |
1 MPNEIFPWKI RVDESRGLAG NSGTKKSNHE ALSRLQSPLN SPKLQPIGSP QASRKTSGSG 60
61 SSAPLYPKWS GALSLASSRA ASPAPSDSFP TFGYSQLGGL ENSSKGSALF NSANSIGTPY 120
121 LSSRNSNSAN EASAMAFHNV SPPSGAESSS ESKSFSASGK GNKADTSAEP SLDAFNSTQI 180
181 KAGSTANSNS TPVEPGEDTI PTAIVVKNIP FSLEKDTLLD HFKQLGIPRP YAFNYHYDNG 240
241 IFRGLAFANF YRPEEAQVVV QTLNGYEING RRLRVEWKRQ LPAAERE
|
| Detection Method: |  |
| Confidence: | 37.69897 |
| Match: | 1pgzA |
| Description: | Crystal Structure of UP1 Complexed With d(TTAGGGTTAG(6-MI)G); A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6-MI) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [288-391] |
1 11 21 31 41 51
| | | | | |
1 KVEKAKKRQA EERRRKQQYK MFEVSFTDQG LNLNDTGTLE TYSRLLLFAH QCIPSREITF 60
61 ETTSKDGNLL NAIRIFCLYF DLDYYARPNG EVLKLVVTHP NKKN
|
| Detection Method: | |
| Confidence: | 6.69897 |
| Match: | 2go9A |
| Description: | No description for 2go9A was found. |
|
Region A: Residues: [392-490] |
1 11 21 31 41 51
| | | | | |
1 TSVSQSQPAS PNLRFNMPAP LATRFLQEHS LNGTKSAPIT PPPSFAVPLT NQLRSIDDKI 60
61 YGNESPLQKA STLSSPFNSK NDNDASTSAS KQSFGVSHF
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
