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View Structure Prediction Details

Protein: SPCC1393.05
Organism: Schizosaccharomyces pombe
Length: 956 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for SPCC1393.05.

Predicted Domain #1
Region A:
Residues: [1-318]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKVSANNQS GFFKFYIDTA LLLNAEFISS FTNCINSEYN GKVKISYSSS SQQFKVIVYE  60
   61 EHKREAFSLF EEIVQKLKRE STVYKKPRLD IHPFGQLHYD FTTLLNFQRY LDLGYGIEDV 120
  121 KIKENEDIVK SKVGKKPTSS DFYIPCLIKP KIITPFEWEG NFKQVIYSPT VYNGSFKRLF 180
  181 YLPDNNDLLK EFAHATNTKY KASLKDNKIV VLANNDQDIN AMLEKMKHIE NLVSQKVYEY 240
  241 PEETLVYAGK IAPCQLKFLK LKFENEILYT AMHTTSIFKS VFNILGSFYT MRLLRNKHDG 300
  301 DSYELVPVFA KNPSKTPP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [319-553]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CNDNFKIFSD DIKLIGCKIF AGVSLNFSSP KPAHRFYELN KTSSNLSIPV LQKPSNFHSS  60
   61 STELSDNSIH QGRRAVDPVV NQNNPSNFEE MIMNKLNKLP TIDKQILGTS SLTHFQDKTT 120
  121 AIEHSINKSN SKQPPRFKFQ LPPRPTSNTL PLEPEEELVT RYSVSSDGNT VDEAITKQSQ 180
  181 TFQLVNSNEF NEVNANDVHK SLRQNCAKLD FDDSKSKNLL SVECLELDKG SDCST

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [554-742]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PKSGSLTPSI DMKFLRLQDE KMDDLGDNYY TILMSSNPVS SYGVGSLYLF QPKIVCSEKY  60
   61 INHEEIDNMN LKSLHRWLSR SLHVLQSFSG EIELNLEFGV ILYPNISSDV SACSHGFMNI 120
  121 YKDLNLPRSY FADCITKSVS NIDSLLNTPV KILFGRTEYT YPLIEHEVLD SKNYFVFKGS 180
  181 LLFTDDKRN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [743-871]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KTEDSTVFFS MICSSKLDQF AFYKDSKQSS TCTINFPLAL WDSRLRIETK VPLNDAILTE  60
   61 FSKSIRFRNV NKDLLLVFGN MEDRVIIHSV TRINENSVPF NKNLLPHSLE FILKCSKVKS 120
  121 YDISPSSIN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [872-956]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKEAFVCLDR SKESKPIESC FSLSIQSVYM QSQFKYNNSI RAGETAPWKL ANKQFIGGAI  60
   61 TENVSDLYTA AIIMVNQLGG IHPTI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.839 a.60.14 Description not found.


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