YRC Public Data Repository - Protein Structure Prediction

Protein:	nse5
Organism:	Schizosaccharomyces pombe
Length:	388 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

No multiple sequence alignment data found for nse5.

Predicted Domain #1

Region A:
Residues: [1-203]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSALKAIIE LCIEEDLLPK SLDVLEYLLS TTSIPIPACY IRMCITLLVH PEYPTSSNIQ  60
   61 ESCNWILQQV VENRSKINFD AWSFENDLSD NDMPKENYLK IFSNQCLFTQ DVDYWDLIAY 120
  121 MSSRPPDLER WMSLMDIWLR ILEIDAEENG SALMKKYMGE DLCELQDAIR ICFSCFTLPQ 180
  181 QTMESPFATS MSKAPAKTES RGS

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [204-388]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NSFEGTSRLA NLGAKLLCLI WAMLPKGRFF VVHLTDAFHF LSKLDERFSK LNAKQQDLFF  60
   61 GNLGASNLRY CLSQYILMKG IGIGINIRHT RCEFTKQLTQ LLPTSLPKNK IRQKLHLRAW 120
  121 VSFLGSALRE SDRNFDKELF YTTLKQLYTM YQQTELVGID RPMAILKDML VLLDISKKLS 180
  181 LDKIV