| Protein: | spt5 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 990 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for spt5.
| Description | E-value | Query Range |
Subject Range |
|
|
864.0 | [0..136] | [990..64] |
|
|
861.0 | [0..136] | [990..122] |
|
|
858.0 | [0..136] | [990..123] |
|
|
855.0 | [0..136] | [990..64] |
|
Region A: Residues: [1-183] |
1 11 21 31 41 51
| | | | | |
1 MDTNSPKSID KDANSTEVDA AEQDAASVKI NSTRASPNGS DLLNDDSEAA KITTNEKQSS 60
61 PVDSHNESPN DTTINKGEDG NENEVDNVNN NDKKEDEDNV EENEEEADAN EEEEEDEEDD 120
121 EEDEEDEDES GGGRRKRARH DRRNQFLDIE AEVDEDEEEL EDEEDEIGRE DGFIEEEVGA 180
181 DYV
|
| Detection Method: |  |
| Confidence: | 3.69897 |
| Match: | 1c1gA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [184-377] |
1 11 21 31 41 51
| | | | | |
1 GDDRRHRELD RQRQELQSVD AERLAEEYRE KYGRSQTVVG DTSNVPQRLL LPSVNDPNIW 60
61 AVRCKIGKEK DIVFTIMRKA MDLQYTSSPL EIISAFQRDS LVGYIYVEAR KQSHVLDALN 120
121 GVLNVYTNNM ILVPIKEMPD LLKVQKQVVE LLPGAYVRIR RGKYAGDLAQ VDNLSENGLT 180
181 ARVRIVPRID YSDG
|
| Detection Method: | |
| Confidence: | 28.154902 |
| Match: | 2exuA |
| Description: | No description for 2exuA was found. |
|
Region A: Residues: [378-462] |
1 11 21 31 41 51
| | | | | |
1 LKRKNSATRP QARLFNESEA FKSNPSKFSK RGPRLFLFNN EEFEDGFLVK DIRISSLITE 60
61 GVNPTLDEVS KFNPNNEDLD LSSLA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [463-507] |
1 11 21 31 41 51
| | | | | |
1 LSVKGGHAEF QPGDHVEVYV GEQTGVSGVV ENVRGSVITM VSSDG
|
| Detection Method: | |
| Confidence: | 2.47 |
| Match: | 2e6zA |
| Description: | No description for 2e6zA was found. |
|
Region A: Residues: [508-578] |
1 11 21 31 41 51
| | | | | |
1 LRLDVPSRGL RKRFRHGDYV KVIAGKYKDD TGMVVRISKD EVTFLSDTLM TELTVFSRDL 60
61 GEASSAQAVN S
|
| Detection Method: | |
| Confidence: | 26.522879 |
| Match: | 2do3A |
| Description: | No description for 2do3A was found. |
|
Region A: Residues: [579-682] |
1 11 21 31 41 51
| | | | | |
1 AYELHDLVQL DVNTVACIFS VDRDTYKVID QNGGVRTVLA SQITMRHSNR RGVATDRNGA 60
61 EIRIGDKVKE VGGEGKQGTI LHIYRAFVFL HNRDIAENNG VFSA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [683-990] |
1 11 21 31 41 51
| | | | | |
1 RSRNVATIAA KGARISADLT KMNPALSNGP ALPPVANLKR TIGRDKAIGA TVRIRRGPMK 60
61 GLLGVIKDTT DANARVELHT GNKMVTIPKE NLLYTTKTGE LISYTEFIER SRGIRPGSIS 120
121 TADGPNVPNW AQGARTPAVA NGSRTPAWNT GSRTPAWNSG SKTPAWNSGS RTPAWNSGNK 180
181 TPAWNAGSRT PAWNSGNKTP AWNVGNKTPA WNSGAKTPAW NAGNKTPSWN NGTKTPAWNA 240
241 NQTPMVANGT NTSWGQTPAY GGFSETNWDT EDNSKPYTAP TPGAWAAPTP GGWDDEEGDS 300
301 PKYVPPSP
|
| Detection Method: | |
| Confidence: | 8.69897 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
