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View Structure Prediction Details

Protein: SPBC359.04c
Organism: Schizosaccharomyces pombe
Length: 358 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC359.04c.

Description E-value Query
Range
Subject
Range
gi|157767772 - gi|157767772|ref|XP_001667366.1| Hypothetical protein CBG01854 [Caenorhabditis briggsae AF16]
gi|187037627, gi... - gi|39590900|emb|CAE58680.1| Hypothetical protein CBG01854 [Caenorhabditis briggsae], gi|187037627|em...
166.0 [0..3] [350..143]
gi|33310026 - gi|33310026|gb|AAQ03243.1|AF414112_1 putative cell wall protein FLO11p [Candida albicans]
gi|68482880, gi|... - gi|68482880|ref|XP_714666.1| putative cell wall adhesin [Candida albicans SC5314], gi|46436253|gb|EA...
147.0 [0..2] [344..181]
gi|31540577 - gi|31540577|gb|AAP48996.1| cellulosomal scaffoldin anchoring protein C; ScaC [Acetivibrio cellulolyt...
136.0 [0..1] [355..564]
TCNA_TRYCR - Sialidase OS=Trypanosoma cruzi GN=TCNA PE=2 SV=1
133.0 [0..2] [353..731]
gi|70876557 - gi|70876557|gb|EAN89996.1| hypothetical protein, conserved [Trypanosoma cruzi]
gi|71421620 - gi|71421620|ref|XP_811847.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
127.0 [0..2] [347..151]

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Predicted Domain #1
Region A:
Residues: [1-214]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSLKSLCLK CIVTLCLLVN AFAFDYASLQ EQDENLLAAC PQYITIYTNG PVPGTTTIYP  60
   61 TSNVASNTSE NYPYTGSKSL SSSSILSNST ISTSSSTPIT ASVPTSSSIL SNSTIPTTSP 120
  121 VPTTSSTPTS SSILSNSTIP SSSSISASTI TTTIISGSTQ FTTTFVDQSI DTVEVVIPTA 180
  181 GYITTTLTSG SSYPVSTTTL QTVSGTQSGL VEVI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [215-358]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPSCGCNPEN SFHLRLVGDS INPSYVYKNT NVSDPDEGNM YTSTEGNTEA VNVFYYDPTV  60
   61 ERILTCDCVR PVYTIYTDDP DSSFDIIKNN NGTFTFVESS SGEIQTLHVS QYGALWITSP 120
  121 EYDGETGGMD DVGFRADDVI LVAY

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 97.161151
Match: PF08431.1
Description: No description for PF08431.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle