| Protein: | SPCC1259.12c |
| Organism: | Schizosaccharomyces pombe |
| Length: | 486 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC1259.12c.
| Description | E-value | Query Range |
Subject Range |
|
|
293.0 | [0..10] | [462..145] |
|
|
284.0 | [0..24] | [353..199] |
|
|
283.0 | [0..24] | [353..439] |
|
|
281.0 | [0..30] | [353..57] |
|
|
279.0 | [0..54] | [459..273] |
|
Region A: Residues: [1-258] |
1 11 21 31 41 51
| | | | | |
1 MTSTPKNLEK QPINFDNLPL YLQGTNYGEN VLRSDPRWLK WEKYLREFDM TREGNVTNTP 60
61 KAIPSSWNPN DKSDSLELMN NNMGVYFFGP EAGTEHDAAS VKADHAIPSN TSIYYYEIQI 120
121 LSRGKEGKMG VGFCRKSMQT NRLPGCTAES WGYHGNSGEK FNCSKTGEAY GPEFTTGDII 180
181 GCGVNFINRT IFYTKNGAYL GVAFKKVSDV LYPVIGLKSH GEHVEVNFGQ NPFLYDIDYA 240
241 IQMEKNKLFE QATKSPKQ
|
| Detection Method: |  |
| Confidence: | 26.0 |
| Match: | 2fnjA |
| Description: | No description for 2fnjA was found. |
| Term | Confidence | Notes |
| binding | 1.80812953968012 | bayes_pls_golite062009 |
| nucleic acid binding | 0.339759264844777 | bayes_pls_golite062009 |
| protein binding | 0.0610567034718369 | bayes_pls_golite062009 |
| DNA binding | 0.0194248464122282 | bayes_pls_golite062009 |
| hydrolase activity | 0.00724990918244621 | bayes_pls_golite062009 |
|
Region A: Residues: [259-360] |
1 11 21 31 41 51
| | | | | |
1 EELKQRQEFL NELISSFLLN NGFVETAKKF CPENTEVSDA SIRKEISSML ANGQLDLAMT 60
61 KIDCQYPVAI QECPDLIMSL RFLRFLQLVK VTHDQRLTKS KG
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.555 | 0.038 | Ran GTPase binding | d.96.1 | Tetrahydrobiopterin biosynthesis enzymes-like |
| View | Download | 0.585 | 0.034 | Ran GTPase binding | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.589 | 0.029 | Ran GTPase binding | a.29.2 | Bromodomain |
| View | Download | 0.917 | 0.009 | Ran GTPase binding | a.60.13 | Putative methyltransferase TM0872, insert domain |
| View | Download | 0.575 | N/A | N/A | a.165.1 | Myosin phosphatase inhibitor 17kDa protein, CPI-17 |
|
Region A: Residues: [361-486] |
1 11 21 31 41 51
| | | | | |
1 TKQISQEEDL RILQPLMNYA QELSNDYEHT KSSNLQAMIK LSMGLLAYFD PFSSPLSFFM 60
61 SSDFHKYMAE QINCLLLELT GHSPDSELRR FLQHTPQEVL YLGFRKYFIT HFVRFVVCFT 120
121 FFLFKK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.797 | N/A | N/A | a.24.3 | Cytochromes |
| View | Download | 0.766 | N/A | N/A | a.24.4 | Hemerythrin |
| View | Download | 0.734 | N/A | N/A | a.60.10 | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
| View | Download | 0.672 | N/A | N/A | i.11.1 | Computational models partly based on NMR data |
| View | Download | 0.574 | N/A | N/A | a.24.16 | Nucleotidyltransferase substrate binding subunit/domain |
