YRC Public Data Repository - Protein Structure Prediction

Protein:	SPCP1E11.05c
Organism:	Schizosaccharomyces pombe
Length:	472 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCP1E11.05c.

Description	E-value	Query Range	Subject Range
ARE2 - Acyl-CoA:sterol acyltransferase, isozyme of Are1p; endoplasmic reticulum enzyme that contributes the... ARE2_YEAST - Sterol O-acyltransferase 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ARE2 PE=1 SV=... gi\|190408982 - gi\|190408982\|gb\|EDV12247.1\| acyl-CoA cholesterol acyltransferase [Saccharomyces cerevisiae RM11-1a] gi\|151944547 - gi\|151944547\|gb\|EDN62825.1\| acyl-CoA cholesterol acyltransferase [Saccharomyces cerevisiae YJM789]	486.0	[0..59]	[472..213]
ARE2_SACBA - Sterol O-acyltransferase 2 OS=Saccharomyces bayanus GN=ARE2 PE=3 SV=1 ARE2_SACU7 - Sterol O-acyltransferase 2 OS=Saccharomyces uvarum (strain ATCC 76518 / CBS 7001 / CLIB 283 / NBRC 1...	484.0	[0..59]	[472..221]
gi\|63376226 - gi\|63376226\|gb\|AAY40784.1\| diacylglycerol acyltransferase DGAT1 [Brassica juncea]	483.0	[0..2]	[469..47]
gi\|32405742, gi\|... - gi\|32405742\|ref\|XP_323484.1\| related to acyl-CoA sterol acyltransferase [MIPS] [Neurospora crassa], ... gi\|85102248 - gi\|85102248\|ref\|XP_961300.1\| related to acyl-CoA sterol acyltransferase [MIPS] [Neurospora crassa OR...	483.0	[0..3]	[471..55]
gi\|5579408 - gi\|5579408\|gb\|AAD45536.1\|AF164434_1 putative diacylglycerol acyltransferase [Brassica napus]	479.0	[0..2]	[469..47]
gi\|28564940 - gi\|28564940\|gb\|AAO32554.1\| ARE2 [Saccharomyces kluyveri]	470.0	[0..23]	[472..120]
DGAT1_MOUSE - Diacylglycerol O-acyltransferase 1 OS=Mus musculus GN=Dgat1 PE=1 SV=1	467.0	[0..25]	[470..59]
gi\|28564191 - gi\|28564191\|gb\|AAO32474.1\| ARE2 [Saccharomyces castellii]	467.0	[0..26]	[472..134]
gi\|50294790, gi\|... - gi\|50294790\|ref\|XP_449806.1\| hypothetical protein CAGL0M10571g [Candida glabrata CBS138], gi\|4952912... gi\|49529120 - gi\|49529120\|emb\|CAG62784.1\| unnamed protein product [Candida glabrata]	466.0	[0..12]	[472..154]

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Predicted Domain #1

Region A:
Residues: [1-162]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIAATPAKSK PSDVNLEQTF KGVSETSKID LRRSRAAYRP LELSPTPSIF ARNYQRNAVD  60
   61 FTGFFVLFWV AVSIMIFMSF LENFELTGRP VVGTIFKYFQ SNLLDLAKAD LAMSSMFLLA 120
  121 FPFQKIFALG YLRWYGLGVY LYSILILLFL SHCVLRCCLS NW

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [163-256]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SWTHRAMFIL HSMVILMKLH SYNVVNGWYS YCYHSLNKLQ SKKTDLDDDE RSSVEFYEHC  60
   61 LNHHGNTYPE NLTIPNALDF LFMPSLCYQL YYPR

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3

Region A:
Residues: [257-472]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TAHVRIHYLI ECALGTFGCI FLLVIISDHF MVPVLAKAIR TIIEAPEDAS ATYFAIRLGH  60
   61 TVAFLMFPFM LSFLLVFWVI FEGVCNFSAE ITRFADRNFY DDWWNCWTWD QFARTWNKPV 120
  121 HYFLLRHVYV PLNSFMSKSL STFFTFFVSS VLHELVMGCI TLKIRGYGLF FQMTQIPYII 180
  181 IQRQKFVRRH RLLGNIAFWF SIIIGIALIA ALYILF

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits