YRC Public Data Repository - Protein Structure Prediction

Protein:	mug191
Organism:	Schizosaccharomyces pombe
Length:	442 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mug191.

Description	E-value	Query Range	Subject Range
gi\|39973805, gi\|... - gi\|39973805\|ref\|XP_368293.1\| hypothetical protein MG00951.4 [Magnaporthe grisea 70-15], gb\|EAA49293....	357.0	[0..2]	[365..39]
gi\|16944622, gi\|... - gi\|32405978\|ref\|XP_323602.1\| probable DFG5 protein [MIPS] [Neurospora crassa], gi\|28922795\|gb\|EAA320... gi\|85101994 - gi\|85101994\|ref\|XP_961253.1\| probable DFG5 protein [MIPS] [Neurospora crassa OR74A]	343.0	[0..1]	[365..18]
gi\|67524735, gi\|... - gi\|67524735\|ref\|XP_660429.1\| hypothetical protein AN2825.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	340.0	[0..21]	[370..1]
gi\|44981206 - gi\|44981206\|gb\|AAS51028.1\| ACL200Wp [Ashbya gossypii ATCC 10895] gi\|45185488, gi\|... - gi\|45185488\|ref\|NP_983204.1\| ACL200Wp [Ashbya gossypii ATCC 10895], gi\|44981206\|gb\|AAS51028.1\| ACL20...	339.0	[0..3]	[362..34]
gi\|51830438 - gi\|51830438\|gb\|AAU09756.1\| YKL046C [Saccharomyces cerevisiae]	339.0	[0..3]	[362..25]
gi\|46117484, gi\|... - gi\|46117484\|ref\|XP_384760.1\| hypothetical protein FG04584.1 [Gibberella zeae PH-1], gi\|42549355\|gb\|E...	339.0	[0..8]	[373..34]

Back

Predicted Domain #1

Region A:
Residues: [1-442]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSENVYLNEA LNVVDQCFKT FFDKYTDRMG SAFACSGTID KDHIFLVWSV AVYAEAMADS  60
   61 LRYTSKFERK FEHVFQALKK YWSPVFNACC AFHYFEGNDD VYYDDNAQVA IGLATAGYYT 120
  121 TNSSRRDHYV SRAESIISLI INKGWNQQRG GIAWHTRTTG PPWTNLNACS TSMSAVAALR 180
  181 LALALDDPNK KQHLVSFAWN CVRWIQENLL DENHIVCDGL SLKDGKWVLD KARFTYNTGT 240
  241 TMTAMSLLMG LGEFTKGLQD IEKLPTYLED MARGALDTNG PLYDQSCNGS FKVWSDNTFF 300
  301 AQHLSEGLMT FSYAMPSSAL AKPAQKMVLD QADFLMKYLR IPKEGLYYRN FGLYKLSPEL 360
  361 TASFNKFFNA NKQFQPDKDE RIQQEGPVEQ RPLCPTLIGS AGAARMLFSA AEIVNRNNPS 420
  421 SGESTTLPQP SHGKKDKDCV IS

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	2.82
Match:	1vd5A
Description:	Crystal Structure of Unsaturated Glucuronyl Hydrolase, Responsible for the Degradation of Glycosaminoglycan, from Bacillus sp. GL1 at 1.8 A Resolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
trehalase activity	4.23942428290504	bayes_pls_golite062009
alpha,alpha-trehalase activity	3.55712700159445	bayes_pls_golite062009
hydrolase activity, acting on glycosyl bonds	2.46063104965293	bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds	1.9745689571582	bayes_pls_golite062009
hydrolase activity	1.55441221605345	bayes_pls_golite062009
binding	1.12989605820294	bayes_pls_golite062009
catalytic activity	1.0882760267763	bayes_pls_golite062009
protein binding	0.0776068739995222	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: