YRC Public Data Repository - Protein Structure Prediction

Protein:	alg5
Organism:	Schizosaccharomyces pombe
Length:	322 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for alg5.

Description	E-value	Query Range	Subject Range
gi\|20803956 - gi\|20803956\|emb\|CAD31533.1\| PROBABLE NODULATION PROTEIN C, N-ACETYLGLUCOSAMINYLTRANSFERASE [Mesorhiz...	162.0	[0..5]	[303..1]
gi\|29831372, gi\|... - gi\|29831372\|ref\|NP_826006.1\| polysaccharide deacetylase/glycosyl transferase [Streptomyces avermitil...	160.0	[0..16]	[320..387]
ACSA1_KOMHA - Cellulose synthase 1 OS=Komagataeibacter hansenii GN=acsAB PE=1 SV=1 gi\|34392433 - gi\|34392433\|dbj\|BAC82543.1\| cellulose synthase subunit AB [Gluconacetobacter xylinus]	160.0	[0..2]	[321..89]
NODC_RHILO - N-acetylglucosaminyltransferase OS=Rhizobium loti GN=nodC PE=3 SV=2 NODC_RHILO - N-acetylglucosaminyltransferase OS=Rhizobium loti (strain MAFF303099) GN=nodC PE=3 SV=2	158.0	[0..7]	[303..3]
ALG5_MOUSE - Dolichyl-phosphate beta-glucosyltransferase OS=Mus musculus GN=Alg5 PE=1 SV=1	157.0	[0..19]	[320..24]
gi\|109120490 - gi\|109120490\|ref\|XP_001084873.1\| PREDICTED: asparagine-linked glycosylation 5 [Macaca mulatta]	156.0	[0..18]	[321..23]
ALG5 - asparagine-linked glycosylation 5, dolichyl-phosphate beta-glucosyltransferase homolog (S. cerevisia...	156.0	[0..18]	[321..23]
gi\|114649361 - gi\|114649361\|ref\|XP_001144830.1\| PREDICTED: similar to dolichyl-phosphate beta-glucosyltransferase i...	156.0	[0..18]	[321..23]
gi\|28202992, gi\|... - gi\|28210555\|ref\|NP_781499.1\| N-acetylglucosaminyltransferase [Clostridium tetani E88], gi\|28202992\|g...	156.0	[0..2]	[312..3]

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Predicted Domain #1

Region A:
Residues: [1-322]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVYIVLYTC LAGFILLFLV YYYLTHSHCP RKQLEGEETC VFIENGQKKS LTLEKWSTSD  60
   61 NIQITVIVPA YNESKRIGNM LQETVDHLEK YYRSSSSAGQ RRWEILIVDD ESKDTTVNAV 120
  121 LEFSNKLDLR DHLRVCSLKR NRGKGGAVTW GMLYARGQYA IFADADGASQ FSDLELLFKN 180
  181 MPPGPRGGVV VGSRAHMVNT AAVVKRSFIR NFLMHCFHKL LQILGIREIG DTQCGFKLFS 240
  241 REAYQSIFPR MHVEGWIFDI EVLTLARFFG LPIIEVPITW HEVGGSKMTL LKDSISMAID 300
  301 LLVIRLNYTF GIWERPSAKR IT

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	31.221849
Match:	2d7iA
Description:	No description for 2d7iA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits