YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC821.05
Organism:	Schizosaccharomyces pombe
Length:	357 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC821.05.

Description	E-value	Query Range	Subject Range
gi\|42550946, gi\|... - gi\|46122473\|ref\|XP_385790.1\| hypothetical protein FG05614.1 [Gibberella zeae PH-1], gi\|42550946\|gb\|E...	317.0	[0..1]	[352..1]
EIF3H_ASPTN - Eukaryotic translation initiation factor 3 subunit H OS=Aspergillus terreus (strain NIH 2624 / FGSC ...	306.0	[0..11]	[353..2]
EIF3H_ASPFU - Eukaryotic translation initiation factor 3 subunit H OS=Neosartorya fumigata (strain ATCC MYA-4609 /... EIF3H_ASPFC - Eukaryotic translation initiation factor 3 subunit H OS=Neosartorya fumigata (strain CEA10 / CBS 144... EIF3H_ASPFU - Eukaryotic translation initiation factor 3 subunit H OS=Aspergillus fumigatus GN=AFUA_1G09970 PE=3 S...	304.0	[0..11]	[353..2]
EIF3H_NEUCR - Eukaryotic translation initiation factor 3 subunit H OS=Neurospora crassa (strain ATCC 24698 / 74-OR... EIF3H_NEUCR - Eukaryotic translation initiation factor 3 subunit H OS=Neurospora crassa GN=NCU07929 PE=3 SV=1	303.0	[0..8]	[353..1]
EIF3H_BOMMO - Eukaryotic translation initiation factor 3 subunit H OS=Bombyx mori PE=2 SV=1	301.0	[0..3]	[349..5]
gi\|67521626, gi\|... - gi\|67521626\|ref\|XP_658874.1\| hypothetical protein AN1270.2 [Aspergillus nidulans FGSC A4], ref\|XP_40... EIF3H_EMENI - Eukaryotic translation initiation factor 3 subunit H OS=Emericella nidulans GN=AN1270 PE=3 SV=1	297.0	[0..9]	[352..1]
EIF3H_XENLA - Eukaryotic translation initiation factor 3 subunit H OS=Xenopus laevis GN=eif3h PE=2 SV=1	296.0	[0..1]	[349..1]
gi\|218194711 - gi\|218194711\|gb\|EEC77138.1\| hypothetical protein OsI_15576 [Oryza sativa Indica Group] gi\|50923675, gi\|... - gi\|50923675\|ref\|XP_472198.1\| OSJNBb0006N15.13 [Oryza sativa (japonica cultivar-group)], gi\|38346118\|...	296.0	[0..8]	[349..23]
EIF3H_XENTR - Eukaryotic translation initiation factor 3 subunit H OS=Xenopus tropicalis GN=eif3h PE=2 SV=1	296.0	[0..1]	[349..1]
gi\|39940168, gi\|... - gi\|39940168\|ref\|XP_359621.1\| hypothetical protein MG05156.4 [Magnaporthe grisea 70-15], gb\|EAA52464....	294.0	[0..2]	[354..59]

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Predicted Domain #1

Region A:
Residues: [1-262]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDTTSLNVP ELESPPIERV ELESLLVMNI IKHCRDSFPN MGTIGQLVGI DIDGVLQVSS  60
   61 SFESPSVLEN EESAVNKSVS GKARQAHTEA MLNRLQYIGA VTGHVGWYLG AYVSSFLSSP 120
  121 FFVETQYAYQ KANPNSIAFL YDLSQSSNGT LYMRAYQLTP EFMAAHEEKT WTASSLNSHN 180
  181 LTPSNVIREL PIVIHNSHLA TCLLHSLSEP PTPASTLTAE AALEDCESNL PLTETFSNFE 240
  241 VSLGTRYRKN IELLLESTDE FH

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	40.0
Match:	2o95A
Description:	No description for 2o95A was found.

Predicted Domain #2

Region A:
Residues: [263-357]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YEQGNLGFHQ RQLAREQAKI QQWIAKRKAE NANRAAENLQ PLPLDDWKRI FKLPAEPRLL  60
   61 DSLLISSQIM KSTQIDEQSS AFLSKLAGVR NAYAS

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

		MCM Score	GO Score	GO Term	SCOP Match	SCOP Description
View	Download	0.811	N/A	N/A	a.24.10	Histidine-containing phosphotransfer domain, HPT domain

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits