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View Structure Prediction Details

Protein: SPAC27D7.09c
Organism: Schizosaccharomyces pombe
Length: 383 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC27D7.09c.

Description E-value Query
Range
Subject
Range
SPAC27D7.10c - But2 family protein
gi|19115528 - gi|19115528|ref|NP_594616.1| hypothetical protein SPAC27D7.10c [Schizosaccharomyces pombe 972h-]
588.0 [0..1] [383..1]
gi|83769021, gi|... - gi|83769021|dbj|BAE59158.1| unnamed protein product [Aspergillus oryzae], gi|195972739|dbj|BAG68492....
gi|169773383 - gi|169773383|ref|XP_001821160.1| hypothetical protein [Aspergillus oryzae RIB40]
60.0 [0..128] [375..158]
gi|111064069 - gi|111064069|gb|EAT85189.1| hypothetical protein SNOG_07723 [Phaeosphaeria nodorum SN15]
59.0 [0..70] [375..50]
gi|66849563, gi|... - gi|70994164|ref|XP_751929.1| GPI anchored cell wall protein [Aspergillus fumigatus Af293], gi|668495...
59.0 [0..80] [375..61]

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Predicted Domain #1
Region A:
Residues: [1-153]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLTSIPIAS TLLSLLAASG TLASPLHKRD DPLNNKQFGL MSIHSGNSYV HLHPFYVGDS  60
   61 GAIYLDPTDG TSTSAVFSMS NGRLVVGNLY ASVDSNGTTI FKSDANAAST KFSAGDATNV 120
  121 GYNLLYNGTQ SAVACPASDN DQVYQVYFGA GNG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [154-383]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NPNCAGIAIE AFVSPSSSSS SSSSAATSTS TRVSSSAKAS TSSGAIAYTT KCVVVPVTAS  60
   61 ATATAKAASA AASSAVYPLF PHGIRLIDSA NPSSNSGNVY SPVVFQKQNN HTNTIFTFDV 120
  121 PQVSGSCELN LHLDTSGFPI TVEGSNGVGQ FILFNLSSVA NDSTVYSNRP NRIAEIGRFN 180
  181 CSSSGCDYAT NVTCPNSYTA VSYEMMALTD DSYLSFFEEA DPLEGLTLRV 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle