YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC19G12.05
Organism:	Schizosaccharomyces pombe
Length:	291 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC19G12.05.

Description	E-value	Query Range	Subject Range
gi\|50906063, gi\|... - gi\|50906063\|ref\|XP_464520.1\| putative Mcsc-pending-prov protein [Oryza sativa (japonica cultivar-gro...	269.0	[0..4]	[288..180]
gi\|46249805 - gi\|46249805\|gb\|AAH68561.1\| Solute carrier family 25 (mitochondrial carrier; phosphate carrier), memb...	265.0	[0..6]	[288..183]
gi\|114558229 - gi\|114558229\|ref\|XP_514375.2\| PREDICTED: solute carrier family 25 member 24 [Pan troglodytes]	264.0	[0..6]	[288..379]
gi\|109012617 - gi\|109012617\|ref\|XP_001083681.1\| PREDICTED: similar to solute carrier family 25 member 24 isoform 2 ...	264.0	[0..6]	[288..164]
SCMC1_RABIT - Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Oryctolagus cuniculus GN=SLC25A24 PE=1 SV=1	264.0	[0..6]	[288..183]

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Predicted Domain #1

Region A:
Residues: [1-291]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTVAKTNPK SSNKPGPVKS IIAGGVAGAI EISITYPAEF AKTRLQLYRN VEGTKAKLPP  60
   61 FGLEWYRGCS TVIVGNSLKA AVRFFAFDSI KKSLSDEHGH LTGPRTVLAG LGAGVAESVL 120
  121 VLTPFESIKT AIIDDRKRPN PRLKGFLQAS RIIVHENGIR GLYRGLAATV ARQAANSGVR 180
  181 FTAYNSIKQS LQSRLPPDEK LSTVTTFLVG SVAGIITVYC TQPIDTVKSR MQSLSASKEY 240
  241 KNSIHCAYKI LTQDGLLRFW SGATPRLARL ILSGGIVFTV YEKVMEILKP F

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Detection Method:	PSI-BLAST
Confidence:	66.221849
Match:	1okcA
Description:	structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits