YRC Public Data Repository - Protein Structure Prediction

Protein:	exg1
Organism:	Schizosaccharomyces pombe
Length:	407 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for exg1.

Description	E-value	Query Range	Subject Range
gi\|49093456, gi\|... - gi\|67527343\|ref\|XP_661656.1\| hypothetical protein AN4052.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	299.0	[0..26]	[406..97]
EXG2_WICAO - Glucan 1,3-beta-glucosidase 2 OS=Wickerhamomyces anomalus GN=EXG2 PE=3 SV=1	290.0	[0..1]	[406..1]
gi\|45184971, gi\|... - gi\|45184971\|ref\|NP_982689.1\| AAR146Wp [Ashbya gossypii ATCC 10895], gi\|44980592\|gb\|AAS50513.1\| AAR14... gi\|44980592 - gi\|44980592\|gb\|AAS50513.1\| AAR146Wp [Ashbya gossypii ATCC 10895]	290.0	[0..1]	[406..14]
EXG_CANAL - Glucan 1,3-beta-glucosidase OS=Candida albicans GN=XOG1 PE=1 SV=4 EXG1_CANAL - Glucan 1,3-beta-glucosidase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=XOG1 PE=1 SV=4	290.0	[0..31]	[407..45]
gi\|477043 - gi\|477043\|pir\|\|A47702 glucan 1,3-beta-glucosidase (EC 3.2.1.58) - yeast (Candida albicans)	289.0	[0..31]	[407..45]
gi\|50420581, gi\|... - gi\|50420581\|ref\|XP_458827.1\| hypothetical protein DEHA0D09196g [Debaryomyces hansenii CBS767], gi\|49...	288.0	[0..1]	[407..12]
EXG_CANOL - Glucan 1,3-beta-glucosidase OS=Candida oleophila GN=EXG1 PE=3 SV=1	287.0	[0..2]	[407..1]
EXG_LACK1 - Glucan 1,3-beta-glucosidase OS=Lachancea kluyveri (strain ATCC 58438 / CBS 3082 / CCRC 21498 / NBRC ... EXG_LACKL, EXG_SACKL - Glucan 1,3-beta-glucosidase OS=Saccharomyces kluyveri GN=EXG1 PE=3 SV=1, Glucan 1,3-beta-glucosidase...	284.0	[0..4]	[407..14]

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Predicted Domain #1

Region A:
Residues: [1-407]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSFTSVFSF FLHALLLKTA FSYVIKRNNP VFDYTSEKVR GVNIGGWLVL ENWITPQLFT  60
   61 QFSSMSNPPT DEWGFCEVLG ADEAASQLAA HYSSFYTESD FATIASWGVN VLRIPIGYWA 120
  121 FNVVDGEPYV QGQEYWLDQA LTWAEQYGLK VWIDLHGVPG SQNGFENSGK TGSIGWQQND 180
  181 TVTRTLDIIT YVANKYTQSQ YASVVIGIET VNEPLGYGLD MDQLKQYDLD AYNIVNPLSS 240
  241 SVATIIHDAY VDLSIWDYGV VSPSSYNLVM DVHRYQLYES DECSKTLDDH LSDVCSIGDS 300
  301 IASSPYITVT GEWSGTLADC TIFEEGVDSS TFIGPNSGDI STWTDEYKGA VRLFIETQLD 360
  361 QFERGAGWIY WTAKTGGPSP TWDMGLLIEY GVFPQPFTDR QYSSYCG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	76.0
Match:	1eqpA
Description:	Exo-beta-(1,3)-glucanase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
hydrolase activity, acting on glycosyl bonds	5.36248919165223	bayes_pls_golite062009
glucan 1,3-beta-glucosidase activity	5.16200085143699	bayes_pls_golite062009
hydrolase activity, hydrolyzing O-glycosyl compounds	4.11319792356479	bayes_pls_golite062009
glucosidase activity	3.69195576225095	bayes_pls_golite062009
beta-glucosidase activity	3.14931331494576	bayes_pls_golite062009
chitinase activity	2.45357334610104	bayes_pls_golite062009
alpha-amylase activity	2.09193270404736	bayes_pls_golite062009
amylase activity	2.03484942782894	bayes_pls_golite062009
catalytic activity	1.85569074294201	bayes_pls_golite062009
hexosaminidase activity	1.26857012744249	bayes_pls_golite062009
hydrolase activity	1.22608062881808	bayes_pls_golite062009
carbohydrate binding	0.4998423581103	bayes_pls_golite062009
binding	0.442009020636084	bayes_pls_golite062009
hyalurononglucosaminidase activity	0.123700697143861	bayes_pls_golite062009
receptor binding	0.0577582382963624	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: