| Protein: | SPCC4G3.18 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 828 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC4G3.18.
| Description | E-value | Query Range |
Subject Range |
|
|
531.0 | [0..76] | [583..36] |
|
|
526.0 | [0..76] | [583..105] |
|
|
497.0 | [0..76] | [583..105] |
|
|
495.0 | [0..76] | [583..105] |
|
|
488.0 | [0..49] | [559..53] |
|
Region A: Residues: [1-260] |
1 11 21 31 41 51
| | | | | |
1 MSDLLERGSL PLVKSWLAIT FANEEDLPFQ VPQIADILVH QKCIERLGTS ENALSVRKNW 60
61 CTSLTKMLQS KDFRIRWSAI ILIHCTISQS WDCLVEHGAT WAKLLIALLN RPETPKTLEI 120
121 AMITVSKMFS STVGRPAVTR ELVTPNLPTF VNNCLRIAES GKCLCTVCSC LYQGIISHSP 180
181 TFRPFVSSIR NICIKILDGE EVVPSSLQKK AAVLYASLYR CVGKGNFEDY WKQSIISILK 240
241 EYHLTLDFLF QFVIEPQTYP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [261-335] |
1 11 21 31 41 51
| | | | | |
1 TREENLMFPK LKGHYEETYQ KALHRCRTLN LILISFLSTK TDKIVLLPIN ALKDLIQRVY 60
61 TVQLSLPVKS VESSV
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [336-551] |
1 11 21 31 41 51
| | | | | |
1 QALLFMVLPH LHTLVNELTL KLFVVIPPAI ILSFDSYLDS LNDCLLSEST HTGVLCSSLK 60
61 LLSKFLDVTH MNVPLSKYEN IVTLVLEYLA NSSKGLASKS IEFSKNRGHS QKKRKTLSES 120
121 QAGDTLMSSE ESHQLYDSDV MDCCFSFLAS ILTHSIALPR LLRTKIDLCT LQISLSNPTS 180
181 TVLISMHNLL LASILSPGDS QAVIVPHAIR IISGPL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [552-828] |
1 11 21 31 41 51
| | | | | |
1 GLVHPDPLVA SHARSSMQTI ESLIHPRFPP LQKHLSPSEF ENTFESRFEP VSLENQSHIS 60
61 PPQVDSQSEY KESSILAPSN PPFETESITD STEIEGIKES FASTDTGLQN NSTATSENKR 120
121 SESELTMSNV LSNEGDRNEE GSEINSSQPS TINHGTDHIN IVSENKETTV SLLHGDVEVE 180
181 ETTNVALNNS QDTETKFTAI DVDFVDRPTS VVSSQIENIN GDENGNTTSS VVETFEKTTD 240
241 VVDEKTTSIN VEGNGEDDEE EDNISLPSIN LESDSDS
|
| Detection Method: | |
| Confidence: | 1.36 |
| Match: | 1dv4A |
| Description: | 30S subunit |
Matching Structure (courtesy of the PDB): |
|
