YRC Public Data Repository - Protein Structure Prediction

Protein:	SPBC3B8.03
Organism:	Schizosaccharomyces pombe
Length:	450 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC3B8.03.

Description	E-value	Query Range	Subject Range
gi\|46437764, gi\|... - gi\|68479882\|ref\|XP_716109.1\| hypothetical protein CaO19.7448 [Candida albicans SC5314], gi\|46437764\|... orf19.7448 - LYS9 CGDID:CAL0005555 Assembly 19, Contig19-2514 (99091, 100425) CDS, translated using codon table 1...	380.0	[0..2]	[447..3]
gi\|51013871 - gi\|51013871\|gb\|AAT93229.1\| YNR050C [Saccharomyces cerevisiae]	379.0	[0..2]	[447..3]
gi\|70993696, gi\|... - gi\|70993696\|ref\|XP_751695.1\| saccharopine dehydrogenase Lys9 [Aspergillus fumigatus Af293], gi\|66849... gi\|159125383 - gi\|159125383\|gb\|EDP50500.1\| saccharopine dehydrogenase [Aspergillus fumigatus A1163]	376.0	[0..3]	[447..9]
gi\|49642168 - gi\|49642168\|emb\|CAH01886.1\| KLLA0C18744p [Kluyveromyces lactis] gi\|50306147, gi\|... - gi\|50306147\|ref\|XP_453035.1\| unnamed protein product [Kluyveromyces lactis], gi\|49642168\|emb\|CAH0188...	375.0	[0..1]	[447..1]
gi\|169771431 - gi\|169771431\|ref\|XP_001820185.1\| hypothetical protein [Aspergillus oryzae RIB40] gi\|220699124, gi... - gi\|238486014\|ref\|XP_002374245.1\| saccharopine dehydrogenase Lys9, putative [Aspergillus flavus NRRL3... gi\|83768044 - gi\|83768044\|dbj\|BAE58183.1\| unnamed protein product [Aspergillus oryzae]	372.0	[0..3]	[447..9]
gi\|32404874, gi\|... - gi\|32404874\|ref\|XP_323050.1\| hypothetical protein [Neurospora crassa], gi\|28922634\|gb\|EAA31859.1\| hy... gi\|85101163 - gi\|85101163\|ref\|XP_961095.1\| hypothetical protein [Neurospora crassa OR74A]	371.0	[0..3]	[447..82]
gi\|49656788 - gi\|49656788\|emb\|CAG89501.1\| DEHA2F17424p [Debaryomyces hansenii] gi\|50425055, gi\|... - gi\|50425055\|ref\|XP_461119.1\| hypothetical protein DEHA0F18865g [Debaryomyces hansenii CBS767], gi\|49...	371.0	[0..2]	[447..3]
gi\|49524630, gi\|... - gi\|50285795\|ref\|XP_445326.1\| unnamed protein product [Candida glabrata], gi\|49524630\|emb\|CAG58232.1\|... gi\|49524630 - gi\|49524630\|emb\|CAG58232.1\| unnamed protein product [Candida glabrata]	370.0	[0..2]	[447..3]

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Predicted Domain #1

Region A:
Residues: [1-450]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSILLLGSG FVAHPTLEYL SRRKENNITV ACRTLSKAEA FINGIPNSKA IALDVNDEAA  60
   61 LEKAVSEHDL TISLIPYTYH ATVMKAAIKH GKHVCTTSYV NPKMAELEEA AIKAGSICMN 120
  121 EIGVDPGIDH LYAIKTIEEV HKAGGKIKSF LSYCGGLPAP EDSNNPLGYK FSWSSRGVLL 180
  181 ALRNSAKFYE NGKLVEIDGK DLMETAKPYF IYPGYAFVCY PNRDSTVYQE RYQIPEAETI 240
  241 IRGTLRYQGF PEFIHCLVDM GFLDETAQEY LSPEAPALPW KEVTARVIKA ESSSEADLIK 300
  301 KISSIHKFKD EDDKKRILNG LKWLGMFSSK PVTPRGNPLD TLCATLEELM QYEEGERDML 360
  361 ILQHKFEVET KEGKRQTRTC TLLDYGVPNG YTSMAKLVGV PCGVATQQIL DGVINTPGVL 420
  421 APNDMKLCGP LIDTLAKEGI RLEEEIIDEE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	105.0
Match:	2axqA
Description:	No description for 2axqA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits