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View Structure Prediction Details

Protein: SPAP27G11.12
Organism: Schizosaccharomyces pombe
Length: 797 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAP27G11.12.

Description E-value Query
Range
Subject
Range
C17orf28 - chromosome 17 open reading frame 28
955.0 [0..1] [795..1]
gi|114670379 - gi|114670379|ref|XP_511668.2| PREDICTED: similar to Chromosome 17 open reading frame 28 [Pan troglod...
951.0 [0..1] [795..247]
HID1_MOUSE - Protein HID1 OS=Mus musculus GN=Hid1 PE=1 SV=1
940.0 [0..1] [795..1]
gi|109489377, gi... - gi|109492220|ref|XP_001081678.1| PREDICTED: similar to CG8841-PA, isoform A [Rattus norvegicus], gi|...
939.0 [0..1] [795..98]
gi|115305130, gi... - gi|116004059|ref|NP_001070392.1| hypothetical protein LOC540436 [Bos taurus], gi|115305130|gb|AAI234...
931.0 [0..1] [795..1]
gi|73965052 - gi|73965052|ref|XP_540424.2| PREDICTED: similar to CG8841-PA, isoform A [Canis familiaris]
928.0 [0..17] [795..113]
gi|40353053, gi|... - gi|45361605|ref|NP_989377.1| hypothetical protein LOC395008 [Xenopus (Silurana) tropicalis], gi|4035...
884.0 [0..1] [795..1]
gi|50745447 - gi|50745447|ref|XP_420116.1| PREDICTED: similar to chromosome 17 open reading frame 28; downregulate...
882.0 [0..24] [795..69]

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Predicted Domain #1
Region A:
Residues: [1-126]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSQQSKLDF RNAVLRLHEE RNIPKFDLIW ERLWTLPETT EDVFHLMSID DLTKVKDNAP  60
   61 ENLQTIIAVL WDKLEDLQKE TLFDDPAAPT TKCALNCMRL LTRLMPIIFE DKSMLEWFDY 120
  121 FAWTVP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [127-231]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KDPNINTPRG ASFLNTVVDY LFLINFTIPA HNDLTHGVHY CIWETGVVYH PTMLKERSYE  60
   61 LHRVEVLRLL LSLFSEEIYR TDGNGSSCCA YVASIANRRL VLCLL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [232-387]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSLINTAMRF NTMFWKPEFL PLDNSVAHMS LIEYCFSVLL ILMSEENNNG TPCYNNYRSS  60
   61 KNTLPKNYFS ILLSKLQPYS DFQIILDGMS RLLYPPMQST IPKRSSLIMF DYYPLVLIFC 120
  121 KLFIHYNERF FHYLIDTDRA IDLFIFLLYL SFEYLG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [388-558]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPSTYNHLKL CVILLKRLTA EKYFCKRLNK PFQQQTALPI SMPVPFEGGT YADFTIIAIS  60
   61 LLVQYTKDYH SEIAQMLCCS LCYLCLYAQN LNSHSSQSLF ELFQSASYPG FLISNDVNHK 120
  121 ILKYVIGAIN NAIQYAQKYN APLLYFFSMH KDYIEAVSAL SFDAIMSVRN S

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [559-698]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SAEGDSAYWT RNGKTFSSKA FDSILLSRLR YVRSKSPTPY YPIESSEFGF TNLKDVTSKD  60
   61 EITDGFDKAL RSNSLRTHRD SRPVQPLLKQ RPQLHRALTE SATLHGNDRS LEDTDEAKVE 120
  121 PIAHSVDYTF KPTVEWWNKW 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.953
Match: 2fj7J
Description: No description for 2fj7J was found.

Predicted Domain #6
Region A:
Residues: [699-797]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WPSLNFRTML DIFTDLSLKI SDMKKAGHPA SEIMAMIKTQ KYPATNQPYI PKYRTKEWRQ  60
   61 QLANFARLFA WQVSCDLDSH KREGPGIFEG TDVKIFDSF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle