| Protein: | jmj3 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 752 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for jmj3.
| Description | E-value | Query Range |
Subject Range |
|
|
700.0 | [0..27] | [740..5] |
|
|
638.0 | [0..22] | [740..2] |
|
|
452.0 | [0..20] | [511..1] |
|
|
445.0 | [0..60] | [477..347] |
|
|
444.0 | [0..60] | [551..341] |
|
|
436.0 | [0..60] | [551..338] |
|
|
435.0 | [0..60] | [551..338] |
|
Region A: Residues: [1-377] |
1 11 21 31 41 51
| | | | | |
1 MQQNVKEKHA GKSDTSVSSL ECEIDYHIEG SDGIPVVEPK ISEFVDMESF IRRVERLGKK 60
61 YGAIKVVRPS SVLNPWNEDT MKPSDVKMDL WLERMVRRKG EYFEIQSDID HGSAGPKKPT 120
121 DMNVDDRFPS NAGSSNDFEN NVAKAIAYYW RSLTHDSLWY GYTNRPSIPF YFIPSISAAQ 180
181 KDRVHLRSNT LINTWPNVGH LFAGKWKTTL PWRVESPELH AVQVHLGGSS LQWYVIPSAH 240
241 SESFKKLAGK LAQDEHWRCS DFLLHQNILF PPSTLVQNGI VTYSTVLKQD ELLITFPGTH 300
301 HSAFCLGDAV LRRFVFRSPR SASNYEFSNL RRLMVSESLY SSKSLWPHSH KPQRACSQKF 360
361 LDEFYLHDLP ESNIHDS
|
| Detection Method: |  |
| Confidence: | 108.0 |
| Match: | 2p5bA |
| Description: | No description for 2p5bA was found. |
|
Region A: Residues: [378-474] |
1 11 21 31 41 51
| | | | | |
1 GNFHPIHSSV DNNSFSQRDF DSPNSINPPS PLMSNHESAS TEHFNSTTTT EKELSSLHVG 60
61 EERKNRSLPL SLIWNSKARE EYIKKQKEEN GDNIEFS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.230 | 0.937 | specific transcriptional repressor activity | a.4.1 | Homeodomain-like |
| View | Download | 0.275 | 0.937 | specific transcriptional repressor activity | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.231 | 0.937 | specific transcriptional repressor activity | a.65.1 | Annexin |
| View | Download | 0.303 | 0.937 | specific transcriptional repressor activity | a.144.1 | PABC (PABP) domain |
| View | Download | 0.277 | 0.937 | specific transcriptional repressor activity | a.44.1 | Disulphide-bond formation facilitator (DSBA), insertion domain |
|
Region A: Residues: [475-558] |
1 11 21 31 41 51
| | | | | |
1 HFDPLYTRPS SHPLHPPPIL GLPVPAQFAR GELFLGRILE DRVSEHMLLL ECEKSDVVEV 60
61 PYECILTSSS AAGRRESSYY NPAL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.500 | d.186.1 | Head-to-tail joining protein W, gpW |
| View | Download | 0.433 | d.186.1 | Head-to-tail joining protein W, gpW |
| View | Download | 0.364 | d.37.1 | CBS-domain |
| View | Download | 0.349 | d.186.1 | Head-to-tail joining protein W, gpW |
| View | Download | 0.337 | d.58.23 | Probable ACP-binding domain of malonyl-CoA ACP transacylase |
|
Region A: Residues: [559-752] |
1 11 21 31 41 51
| | | | | |
1 KAPNIVYDDG VPINWNEYSE LPSLDRFVLP KLLPGKPIEF TPPISVEPTS IKTIAAEESS 60
61 EPTSSVDVAP TPVEDVNVNL ESISNTNESV VDLSDPLVSK NGFEDVERSS VADLEEDVLE 120
121 TRSSIFETSD IDDRLTVIDR SQSVVPSESE FSIAGANLTR RNAVDFSVSL DTYELYVSDE 180
181 VENVDDFSLF PSLE
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
