YRC Public Data Repository - Protein Structure Prediction

Protein:	SPBP23A10.06
Organism:	Schizosaccharomyces pombe
Length:	335 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBP23A10.06.

Description	E-value	Query Range	Subject Range
gi\|74006830 - gi\|74006830\|ref\|XP_537947.2\| PREDICTED: similar to ADP/ATP translocase 3 (Adenine nucleotide translo...	273.0	[0..19]	[328..175]
gi\|114597246 - gi\|114597246\|ref\|XP_517556.2\| PREDICTED: solute carrier family 25 (mitochondrial carrier; adenine nu...	266.0	[0..12]	[327..198]
gi\|46249805 - gi\|46249805\|gb\|AAH68561.1\| Solute carrier family 25 (mitochondrial carrier; phosphate carrier), memb...	262.0	[0..9]	[328..179]
gi\|68366574 - gi\|68366574\|ref\|XP_694733.1\| PREDICTED: similar to ADP,ATP carrier protein 2 (ADP/ATP translocase 2)...	262.0	[0..13]	[329..11]
gi\|109012617 - gi\|109012617\|ref\|XP_001083681.1\| PREDICTED: similar to solute carrier family 25 member 24 isoform 2 ...	261.0	[0..9]	[328..160]

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Predicted Domain #1

Region A:
Residues: [1-335]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQIGAATEGV EADLSVNAEP DVKPIAKMLS ACVGSVITTL TVTPLDVVKT RLQSESISQY  60
   61 SSTQPISSAK ILGKGRPAPK PLGGPVSGLY QIARHEGVRS LWRGLVPSLT MLLPANTVQF 120
  121 LGYEQLLPLY SDWGFPAAAA IAGASARTIS ATIVSPIELF RTRVQAVGGH YPPGHAREIA 180
  181 NEVFDGLKLM IHQKGILNLW SGVSVTLWRD VPFSAFYWWS YERIRLFLLG HPSLQAFSSS 240
  241 QSTKDLYINF VSGGISGTLA TLLTQPFDVS KTAKQVHGHT LTRGQFMLTL WKRGGPKALW 300
  301 KGTLPRCVKV APSCAIMISS YHLTKKYFSE SVDAY

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	69.0
Match:	1okcA
Description:	structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits