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View Structure Prediction Details

Protein: SPCP1E11.08
Organism: Schizosaccharomyces pombe
Length: 260 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCP1E11.08.

Description E-value Query
Range
Subject
Range
gi|62642770, gi|... - gi|86129704|gb|ABC86561.1| TGF beta-inducible nuclear protein [Rattus norvegicus], gi|62642770|ref|X...
NSA2_MOUSE - Ribosome biogenesis protein NSA2 homolog OS=Mus musculus GN=Nsa2 PE=2 SV=1
448.0 [0..1] [259..1]
gi|68534732 - gi|68534732|gb|AAH98657.1| Cdk105 protein [Rattus norvegicus]
447.0 [0..1] [259..1]
gi|73949746 - gi|73949746|ref|XP_850805.1| PREDICTED: similar to TGF beta-inducible nuclear protein 1 (L-name rela...
NSA2_BOVIN - Ribosome biogenesis protein NSA2 homolog OS=Bos taurus GN=NSA2 PE=2 SV=1
gi|149726539 - gi|149726539|ref|XP_001504729.1| PREDICTED: similar to TGF beta-inducible nuclear protein 1 [Equus c...
446.0 [0..1] [259..1]
gi|134025771, gi... - gi|89272759|emb|CAJ83866.1| TGF beta-inducible nuclear protein 1 [Xenopus tropicalis], gi|62859971|r...
446.0 [0..1] [259..1]
ENSCJAT00000032828 - null
NSA2 - NSA2 ribosome biogenesis homolog (S. cerevisiae)
gi|114599686 - gi|114599686|ref|XP_517704.2| PREDICTED: hypothetical protein [Pan troglodytes]
446.0 [0..1] [259..1]
gi|109077600, gi... - gi|109077602|ref|XP_001103534.1| PREDICTED: TGF beta-inducible nuclear protein 1 isoform 2 [Macaca m...
445.0 [0..1] [259..1]
gi|49118803 - gi|49118803|gb|AAH73255.1| Unknown (protein for MGC:80606) [Xenopus laevis]
444.0 [0..1] [259..1]
gi|41054639, gi|... - gi|41054639|ref|NP_955862.1| TGF beta-inducible nuclear protein 1 [Danio rerio], gi|28278483|gb|AAH4...
444.0 [0..1] [259..1]

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Predicted Domain #1
Region A:
Residues: [1-135]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPQNEYIEES IRKHGRRFDH EERKRKKAAR EAHDASLYAQ KTRGIKAKLY QEKRRKEKIQ  60
   61 MKKTIKQHEE RNATQRGSDA QTQGAVPTYL LDREQESQAK MLSSAVKQKR KEKAAKYSVP 120
  121 LPQVRGVAEE EMFKV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.488 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.488 N/A N/A a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.480 N/A N/A a.216.1 Description not found.
View Download 0.480 N/A N/A a.121.1 Tetracyclin repressor-like, C-terminal domain
View Download 0.439 N/A N/A d.19.1 MHC antigen-recognition domain
View Download 0.393 N/A N/A a.47.5 Description not found.
View Download 0.357 N/A N/A f.36.1 Neurotransmitter-gated ion-channel pransmembrane pore
View Download 0.308 N/A N/A a.7.1 Spectrin repeat
View Download 0.305 N/A N/A a.26.1 4-helical cytokines
View Download 0.261 N/A N/A a.19.1 Fertilization protein

Predicted Domain #2
Region A:
Residues: [136-260]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IRTGKSKKNS WKRMITKATF VGDGFTRRPV KYERFIRPMA LRQKKANVTH KELGVTMQLP  60
   61 IIGVKKNPQS PTYTQLGVLT KGTVIEVNVS ELGLVTSGGK VVWGKYAQIT NNPELDGCVN 120
  121 ALLLT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.293 N/A N/A d.129.3 Bet v1-like
View Download 0.262 N/A N/A d.20.1 UBC-like
View Download 0.248 N/A N/A d.297.1 Description not found.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle