YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: SPAC186.01
Organism: Schizosaccharomyces pombe
Length: 326 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC186.01.

Description E-value Query
Range
Subject
Range
gi|157767770 - gi|157767770|ref|XP_001667365.1| Hypothetical protein CBG01853 [Caenorhabditis briggsae AF16]
gi|187037626, gi... - gi|39590899|emb|CAE58679.1| Hypothetical protein CBG01853 [Caenorhabditis briggsae], gi|187037626|em...
165.0 [0..2] [318..99]
gi|33310026 - gi|33310026|gb|AAQ03243.1|AF414112_1 putative cell wall protein FLO11p [Candida albicans]
gi|68482880, gi|... - gi|68482880|ref|XP_714666.1| putative cell wall adhesin [Candida albicans SC5314], gi|46436253|gb|EA...
133.0 [0..3] [322..317]
gi|27881490, gi|... - gi|27881490|ref|NP_775080.1| zonadhesin isoform 4 [Homo sapiens], gi|12667416|gb|AAK01434.1|AF332978...
129.0 [0..7] [288..699]

Back

Predicted Domain #1
Region A:
Residues: [1-153]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVVKYIIFS FALAPLLLVN ANTYNFTQIQ KRSVNQAVLE SSQDTNSVGG EASSTACPLF  60
   61 TTIYTNGITP GTTTIYPTSI STSGVSSNNI DETSVSSESI ITSTITTTIT SGSQLYTTTI 120
  121 TGQNTPVDTV EVVIPTAGTF TTTLTSGSSY PVA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.834 N/A N/A b.61.4 Quinohemoprotein amine dehydrogenase A chain, domain 3

Predicted Domain #2
Region A:
Residues: [154-326]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTTVRTASGT QSGEVEVITP SCGCSPENSF HLKIDNDKIS PSYVYMDPNA PVRTNGAGRE  60
   61 GNMFASTNGD NEGLNLFYYD STIQRVLTCD CQRPSYTVYI EDPIIGNGFS SAWNLIKNSD 120
  121 GIFTPVESRN NEPLHFHVDN NGRVWMTSQE YDTEVSSTDE RNFRANDVTL QLY

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 113.09691
Match: PF08431.1
Description: No description for PF08431.1 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle