YRC Public Data Repository - Protein Structure Prediction

Protein:	SPAC23H3.12c
Organism:	Schizosaccharomyces pombe
Length:	226 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPAC23H3.12c.

Description	E-value	Query Range	Subject Range
gi\|46121383, gi\|... - gi\|46121383\|ref\|XP_385246.1\| hypothetical protein FG05070.1 [Gibberella zeae PH-1], gi\|42551566\|gb\|E...	280.0	[0..1]	[199..1]
gi\|28923800, gi\|... - gi\|32408155\|ref\|XP_324559.1\| hypothetical protein [Neurospora crassa], gi\|28923800\|gb\|EAA32965.1\| co... gi\|85106532 - gi\|85106532\|ref\|XP_962201.1\| hypothetical protein NCU05202 [Neurospora crassa OR74A]	252.0	[0..1]	[206..1]
gi\|66850304, gi\|... - gi\|70995828\|ref\|XP_752669.1\| conserved hypothetical protein [Aspergillus fumigatus Af293], gi\|668503...	250.0	[0..1]	[188..1]
gi\|115491905, gi... - gi\|115491905\|ref\|XP_001210580.1\| conserved hypothetical protein [Aspergillus terreus NIH2624], gi\|11...	244.0	[0..1]	[188..1]
gi\|116194442, gi... - gi\|88179732\|gb\|EAQ87200.1\| hypothetical protein CHGG_03819 [Chaetomium globosum CBS 148.51], gi\|1161...	240.0	[0..1]	[188..1]
gi\|38106641, gi\|... - gi\|39976043\|ref\|XP_369412.1\| hypothetical protein MGG_06052 [Magnaporthe grisea 70-15], gb\|EAA52924....	230.0	[0..1]	[188..1]
gi\|119181653, gi... - gi\|90300810\|gb\|EAS30441.1\| hypothetical protein CIMG_05920 [Coccidioides immitis RS], gi\|119181653\|r...	228.0	[0..1]	[188..1]
gi\|169620209, gi... - gi\|169620209\|ref\|XP_001803516.1\| hypothetical protein SNOG_13307 [Phaeosphaeria nodorum SN15], gi\|11...	203.0	[0..1]	[187..1]
gi\|44982761 - gi\|44982761\|gb\|AAS52024.1\| ADR104Cp [Ashbya gossypii ATCC 10895] gi\|44982761, gi\|... - gi\|45187977\|ref\|NP_984200.1\| ADR104Cp [Ashbya gossypii ATCC 10895], gi\|44982761\|gb\|AAS52024.1\| ADR10...	203.0	[0..1]	[188..30]
gi\|49086186, gi\|... - gi\|67517680\|ref\|XP_658626.1\| hypothetical protein AN1022.2 [Aspergillus nidulans FGSC A4], ref\|XP_40...	199.0	[0..1]	[188..3]

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Predicted Domain #1

Region A:
Residues: [1-226]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIIALPLPN QRVFLHCYPS EYLAKKVTIH DKIINRIYKY WDSWSASKSY TKQKVVSLGN  60
   61 RILHATPYEE NFLRAIAPVK KLNDTELHQT LYIEHPPNLE SSTILAELNR SKQLQKTHTN 120
  121 YLIGNIIGLP LTIPFILIPL IPNIPGFYLC YRAYCNFRAI QGSIQLARVM SIENIQMQES 180
  181 EKLEKALKLF TNGDATPLNA LIGHPDFVDR YKRAVAQEQR KSKIIK

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits