| Protein: | apl5 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 834 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for apl5.
| Description | E-value | Query Range |
Subject Range |
|
|
425.0 | [0..2] | [729..82] |
|
|
415.0 | [0..2] | [729..13] |
|
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414.0 | [0..2] | [729..13] |
|
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411.0 | [0..2] | [729..13] |
|
Region A: Residues: [1-615] |
1 11 21 31 41 51
| | | | | |
1 MVFERTLIDL IKGIRSHAND EEAFIATCLL ECRKEATSQD ADLKSEAILK LAYLEMLGVD 60
61 ISWASFQIVE VMSSSKILQK QKGYLAAVQS FKPDTDVLML TTNLLKKDLM SSKVPEITLA 120
121 IDGLSHFSTL GLARDLYRDV LILLNHSVPY VRKRTILLLY RLCLQYPEAI SACIPKLRER 180
181 LDDPDTSVVN AAVSVICELA RRAPKNYLEF APDLFHLLTT SSNNWMLIKL IKLFASLTPY 240
241 EPRLVKKLIP SLTDIIENTH AMSLLYECIN TIVSGNMLVG HSQCDKLASL CASKLRGFFE 300
301 DTDQNLKYIA LLCLRKLANT HPSLVSAQLD IILKCLVDTD TSIRLRALDL VNEIVNKENI 360
361 RTIVKTLMLQ LIVSSDESAV EDIRNSTATR IIEMTSKSTY MNIADFEWLL TVYVDLANIP 420
421 GIDTGTLLNN QIIDLCVRVK ALRPFSVDIF SQAILDPSYV STTDCSVSEK RTDILPAIIW 480
481 CLGEYAEFIE EYLDILDALT RPSFKKCSNL AHRLLLQAIT KIFCQWCLEE EPTWGVEKFG 540
541 LVKLWVEKIV SFIEQFLNFQ DMEIQRRASE FYILFNQVSD IVNTSDTMEV LELQKKPPYI 600
601 VQNTMYKLFF GEPLN
|
| Detection Method: |  |
| Confidence: | 85.39794 |
| Match: | 1w63A |
| Description: | AP1 clathrin adaptor core |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [616-692] |
1 11 21 31 41 51
| | | | | |
1 PVAVKAQRKV MPDENLDLNC PINGVIEVPK ELLENIIQSD DSLINFDTEV PSSGIDTFSK 60
61 KQFNSLESVP VQRDLSS
|
| Detection Method: | |
| Confidence: | 13.39794 |
| Match: | 1pzdA |
| Description: | Structural Identification of a conserved appendage domain in the carboxyl-terminus of the COPI gamma-subunit. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [693-834] |
1 11 21 31 41 51
| | | | | |
1 PFYLSSNQHT TTTNSEPENL NVETSMSDEA FNADKVTKGL LMLLIILFLL IILVTKNKRR 60
61 RKIFTSPSLQ AMVVAQDEVP EGISLADIEN KENPSNSNVY SLISLDPPLS TNQGSMGDIV 120
121 LETKSPIRVE KKKSKKKKKK KV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
